CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J09064
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.J09064
T203048_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J09064.1.p
GRAS
1
212
MRAVGRELEAYAEGLGMYLEFRAVDRSLESLHIDDLGIDADEAVAINSILELHCVVKESRGALNSVLQTIRKLSPKAFVLVEQDAGHNGPFFLGRFMEALHYYAAVFDALDAALPRYDARRARVEQFHFGAEIRNVVGCEGAARVERHERADQWRRRMSRAGFQSVPIRMAARAREWLEENAGGGGYTVAEEKGCLVLGWKGKPVIAASCWK
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J35085
Panicum virgatum
Pavir.J35085
N
0.989
Sb03g043030
Sorghum bicolor
Sb03g043030
N
0.972
Si000959m.g
Setaria italica
Si000959m.g
N
0.953
TRAES3BF071100020CFD_g
Triticum aestivum
TRAES3BF071100020CFD_g
N
0.934
TRAES3BF071100040CFD_g
Triticum aestivum
TRAES3BF071100040CFD_g
N
0.929
ORGLA01G0347800
Oryza glaberrima
ORGLA01G0347800
N
0.929
BRADI2G57940
Brachypodium distachyon
BRADI2G57940
N
0.924
OB01G49600
Oryza brachyantha
OB01G49600
N
0.880
OBART01G40850
Oryza barthii
OBART01G40850
N
0.812
OGLUM01G45030
Oryza glumaepatula
OGLUM01G45030
N
0.749
BGIOSGA005001
Oryza indica
BGIOSGA005001
N
0.730
ONIVA01G45910
Oryza nivara
ONIVA01G45910
N
0.730
TRAES3BF071100030CFD_g
Triticum aestivum
TRAES3BF071100030CFD_g
N
0.701