Pavir.J20385 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.J20385 T203065_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J20385.1.p GRAS 201 571

Links

Other GRAS family TFs
Other Panicum virgatum TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ea03635 Panicum virgatum Pavir.Ea03635 N 0.978
Si000832m.g Setaria italica Si000832m.g N 0.978
Sb03g041760 Sorghum bicolor Sb03g041760 N 0.946
OPUNC01G38160 Oryza punctata OPUNC01G38160 N 0.940
OGLUM01G43650 Oryza glumaepatula OGLUM01G43650 N 0.938
OMERI01G36330 Oryza meridionalis OMERI01G36330 N 0.938
OBART01G39420 Oryza barthii OBART01G39420 N 0.938
ORGLA01G0333300 Oryza glaberrima ORGLA01G0333300 N 0.938
OLONG_003002 Oryza longistaminata OLONG_003002 N 0.935
ONIVA01G44280 Oryza nivara ONIVA01G44280 N 0.935
ORUFI01G42800 Oryza rufipogon ORUFI01G42800 N 0.932
OS01G0881500 Oryza sativa OS01G0881500 N 0.930
OB01G48180 Oryza brachyantha OB01G48180 N 0.924
BGIOSGA000383 Oryza indica BGIOSGA000383 N 0.920
BRADI2G56910 Brachypodium distachyon BRADI2G56910 N 0.919
LPERR01G33950 Leersia perrieri LPERR01G33950 N 0.919
F775_25916 Aegilops tauschii F775_25916 N 0.911
Traes_3AL_6E16C8167 Triticum aestivum Traes_3AL_6E16C8167 N 0.911
MLOC_6971 Hordeum vulgare MLOC_6971 N 0.911
TRIUR3_26381 Triticum urartu TRIUR3_26381 N 0.908
TRAES3BF021600230CFD_g Triticum aestivum TRAES3BF021600230CFD_g N 0.905
Traes_3DL_BF7D83705 Triticum aestivum Traes_3DL_BF7D83705 N 0.902
Pavir.J36240 Panicum virgatum Pavir.J36240 N 0.843
Sb09g020850 Sorghum bicolor Sb09g020850 N 0.835
Si021635m.g Setaria italica Si021635m.g N 0.835
Pavir.J01797 Panicum virgatum Pavir.J01797 N 0.832
GRMZM2G153333 Zea mays GRMZM2G153333 N 0.808
chr1.CM0982.460.nd Lotus japonicus chr1.CM0982.460.nd N 0.744
GSMUA_Achr10G17290_001 Musa acuminata GSMUA_Achr10G17290_001 N 0.721
GSMUA_Achr3G02410_001 Musa acuminata GSMUA_Achr3G02410_001 N 0.715
Aquca_014_00370 Aquilegia coerulea Aquca_014_00370 N 0.713
Ca_13102 Cicer arietinum Ca_13102 N 0.704