CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.J39141
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.J39141
T203098_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J39141.1.p
GRAS
240
613
LHALLLRCAQAVAADDRRVAHDLLAQVRRHSSPTGDAAQRLAHCFAEGLEARLAGTGSRLYHSLMVRPTSAVDFLKAYQLFMAACCCKKVAFTFSNKTIFDAAAGRRRLHIVDYGISYGFQWPGLLRGLAARQGGPPEVRITGIDLPQPGFRPAYQIEETGRRLAGCARELGVPFRFRGIAAKRETISPEDLDIDPGEVLVVSSLCHFRHLMDESVVLGRPSPRDEVLGNIRRMRPDVFIHGVVNGGYGTTYFPTRFRELLFYWSAQFDLLEATVPRESPERLLVERDIFGRSAVNVIACEGADRVERPETYRQWQARNQRAGLRQLPLEPQAVKVVLDKVRDNYHKDFVVDEDQSWLLHRWKGRVLYGLSTWV
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava43069.valid.m1
Manihot esculenta
cassava43069.valid.m1
N
0.000
Ciclev10007362m.g
Citrus clementina
Ciclev10007362m.g
N
0.000
Eucgr.B00857
Eucalyptus grandis
Eucgr.B00857
N
0.000
gene09412-v1.0-hybrid
Fragaria vesca
gene09412-v1.0-hybrid
N
0.000
Gorai.008G288900
Gossypium raimondii
Gorai.008G288900
N
0.000
MDP0000184989
Malus domestica
MDP0000184989
N
0.000
orange1.1g001409m.g
Citrus sinensis
orange1.1g001409m.g
N
0.000
PK06396.1
Cannabis sativa
PK06396.1
N
0.000
Pm025109
Prunus mume
Pm025109
N
0.000