CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0033s0460
(
Salix purpurea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
SapurV1A.0033s0460
T203110_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0033s0460.1.p
GRAS
327
684
IINPVCQAAELIETGNPVLAQGILARLNHQLSVPISKPYQRTAFYFKEALQLLLNVNNNNCIGTAYNLIFKIGAYKSFSEISPILQFANFTCNQALLEAFEGFDRIHVVDFDIGYGGQWASLMQELASRNGGAPSLKITAFVSPSSRDELELDFTQENLRIFASEINMPFELEILSLESLSSGSWPMNLCTLDKEVTAINLPVGSFSNYPSTLPLVLRFVKQLSPKVVVSLDRGCDRSDLPFAHHINLAIQSYTSLLESLDAVNVNLDILQRIERFLVQPGIEKMVLGRRGCFHRTPPWRSLFLQSGFTPLTFSNFTESQAEYLLQRTPVRGFHVEKKQSSLVLCWQQKDLVSASAWS
SapurV1A.0033s0460.2.p
GRAS
321
678
IINPVCQAAELIETGNPVLAQGILARLNHQLSVPISKPYQRTAFYFKEALQLLLNVNNNNCIGTAYNLIFKIGAYKSFSEISPILQFANFTCNQALLEAFEGFDRIHVVDFDIGYGGQWASLMQELASRNGGAPSLKITAFVSPSSRDELELDFTQENLRIFASEINMPFELEILSLESLSSGSWPMNLCTLDKEVTAINLPVGSFSNYPSTLPLVLRFVKQLSPKVVVSLDRGCDRSDLPFAHHINLAIQSYTSLLESLDAVNVNLDILQRIERFLVQPGIEKMVLGRRGCFHRTPPWRSLFLQSGFTPLTFSNFTESQAEYLLQRTPVRGFHVEKKQSSLVLCWQQKDLVSASAWS
Links
Other
GRAS
family TFs
Other
Salix purpurea
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0033s0490
Salix purpurea
SapurV1A.0033s0490
N
0.890
POPTR_0002s14500
Populus trichocarpa
POPTR_0002s14500
N
0.879
POPTR_0002s14550
Populus trichocarpa
POPTR_0002s14550
N
0.876
SapurV1A.1971s0010
Salix purpurea
SapurV1A.1971s0010
N
0.815
SapurV1A.0382s0350
Salix purpurea
SapurV1A.0382s0350
N
0.815
POPTR_0014s05910
Populus trichocarpa
POPTR_0014s05910
N
0.812
POPTR_0014s05940
Populus trichocarpa
POPTR_0014s05940
N
0.806
SapurV1A.0248s0400
Salix purpurea
SapurV1A.0248s0400
N
0.789
30174.m008828
Ricinus communis
30174.m008828
N
0.753
TCM_005571
Theobroma cacao
TCM_005571
N
0.753
cassava19916.m1
Manihot esculenta
cassava19916.m1
N
0.753
Gorai.008G106000
Gossypium raimondii
Gorai.008G106000
N
0.730
Ciclev10019083m.g
Citrus clementina
Ciclev10019083m.g
N
0.716
orange1.1g005237m.g
Citrus sinensis
orange1.1g005237m.g
N
0.716
evm.TU.supercontig_49.157
Carica papaya
evm.TU.supercontig_49.157
N
0.716
VIT_15s0048g00270
Vitis vinifera
VIT_15s0048g00270
N
0.711