CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0261s0120
(
Salix purpurea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
SapurV1A.0261s0120
T203141_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0261s0120.1.p
GRAS
217
587
PRRLLFECANAISEGNIEKALALINELRQLVSIQGDPPQRIAAYMVEGLAARMAESGIYLYKSLKCKEPPSDDRLAAMQILLEICPCFKFGFIAANGAMIEAFKGERRVHIIDFDINQGSQYITLIQTLANQPGKLPNLRLTGVDDPESVQRSVGGLRIIGQRLEKLAEELKVPFEFHAVASKTSVVSPSMLNCKPGEALIVNFAYQLHHMPDESVSTVNERDQLLRMAKSLNPKLVTVVEQDVNTNTAPFFPRFTEVYNYYSAVFDSLDATLPRVSQDRLNVEKQCLARDIVNIVACEGEERIERYEVAGKWRARMMMAGFTSCSISPSVVDLIRKLIKQYCDRYMLKEEVGALLFGWEDKSLVVASAWK
SapurV1A.0261s0120.2.p
GRAS
217
587
PRRLLFECANAISEGNIEKALALINELRQLVSIQGDPPQRIAAYMVEGLAARMAESGIYLYKSLKCKEPPSDDRLAAMQILLEICPCFKFGFIAANGAMIEAFKGERRVHIIDFDINQGSQYITLIQTLANQPGKLPNLRLTGVDDPESVQRSVGGLRIIGQRLEKLAEELKVPFEFHAVASKTSVVSPSMLNCKPGEALIVNFAYQLHHMPDESVSTVNERDQLLRMAKSLNPKLVTVVEQDVNTNTAPFFPRFTEVYNYYSAVFDSLDATLPRVSQDRLNVEKQCLARDIVNIVACEGEERIERYEVAGKWRARMMMAGFTSCSISPSVVDLIRKLIKQYCDRYMLKEEVGALLFGWEDKSLVVASAWK
SapurV1A.0261s0120.3.p
GRAS
217
587
PRRLLFECANAISEGNIEKALALINELRQLVSIQGDPPQRIAAYMVEGLAARMAESGIYLYKSLKCKEPPSDDRLAAMQILLEICPCFKFGFIAANGAMIEAFKGERRVHIIDFDINQGSQYITLIQTLANQPGKLPNLRLTGVDDPESVQRSVGGLRIIGQRLEKLAEELKVPFEFHAVASKTSVVSPSMLNCKPGEALIVNFAYQLHHMPDESVSTVNERDQLLRMAKSLNPKLVTVVEQDVNTNTAPFFPRFTEVYNYYSAVFDSLDATLPRVSQDRLNVEKQCLARDIVNIVACEGEERIERYEVAGKWRARMMMAGFTSCSISPSVVDLIRKLIKQYCDRYMLKEEVGALLFGWEDKSLVVASAWK
SapurV1A.0261s0120.4.p
GRAS
217
587
PRRLLFECANAISEGNIEKALALINELRQLVSIQGDPPQRIAAYMVEGLAARMAESGIYLYKSLKCKEPPSDDRLAAMQILLEICPCFKFGFIAANGAMIEAFKGERRVHIIDFDINQGSQYITLIQTLANQPGKLPNLRLTGVDDPESVQRSVGGLRIIGQRLEKLAEELKVPFEFHAVASKTSVVSPSMLNCKPGEALIVNFAYQLHHMPDESVSTVNERDQLLRMAKSLNPKLVTVVEQDVNTNTAPFFPRFTEVYNYYSAVFDSLDATLPRVSQDRLNVEKQCLARDIVNIVACEGEERIERYEVAGKWRARMMMAGFTSCSISPSVVDLIRKLIKQYCDRYMLKEEVGALLFGWEDKSLVVASAWK
Links
Other
GRAS
family TFs
Other
Salix purpurea
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0005s20890
Populus trichocarpa
POPTR_0005s20890
N
0.946
POPTR_0002s07430
Populus trichocarpa
POPTR_0002s07430
N
0.930
SapurV1A.0267s0240
Salix purpurea
SapurV1A.0267s0240
N
0.905
cassava26784.m1
Manihot esculenta
cassava26784.m1
N
0.870
cassava42388.valid.m1
Manihot esculenta
cassava42388.valid.m1
N
0.862
29648.m001919
Ricinus communis
29648.m001919
N
0.857
Gorai.005G083700
Gossypium raimondii
Gorai.005G083700
N
0.817
Ciclev10000671m.g
Citrus clementina
Ciclev10000671m.g
N
0.816
orange1.1g007853m.g
Citrus sinensis
orange1.1g007853m.g
N
0.816
TCM_035362
Theobroma cacao
TCM_035362
N
0.816
chr1.CM0982.460.nd
Lotus japonicus
chr1.CM0982.460.nd
N
0.811
gene01015-v1.0-hybrid
Fragaria vesca
gene01015-v1.0-hybrid
N
0.802
Gorai.009G251800
Gossypium raimondii
Gorai.009G251800
N
0.802
PRUPE_ppa003310mg
Prunus persica
PRUPE_ppa003310mg
N
0.799
MDP0000727836
Malus domestica
MDP0000727836
N
0.799
evm.TU.supercontig_26.96
Carica papaya
evm.TU.supercontig_26.96
N
0.798
Ca_13101
Cicer arietinum
Ca_13101
N
0.798
MDP0000859087
Malus domestica
MDP0000859087
N
0.794
Pm022704
Prunus mume
Pm022704
N
0.794
Lus10029747.g
Linum usitatissimum
Lus10029747.g
N
0.791
Lus10042776.g
Linum usitatissimum
Lus10042776.g
N
0.789
MTR_1g029420
Medicago truncatula
MTR_1g029420
N
0.786
PK29476.1
Cannabis sativa
PK29476.1
N
0.780
VIT_04s0044g01370
Vitis vinifera
VIT_04s0044g01370
N
0.766
GLYMA06G12701
Glycine max
GLYMA06G12701
N
0.765
SCL1
Vitis vinifera
VIT_18s0001g15270
N
0.764
GLYMA04G42090
Glycine max
GLYMA04G42090
N
0.759
Eucgr.F04276
Eucalyptus grandis
Eucgr.F04276
N
0.759
PDK_20s1392371g003
Phoenix dactylifera
PDK_20s1392371g003
N
0.757
Aquca_014_00370
Aquilegia coerulea
Aquca_014_00370
N
0.756
MTR_3g089055
Medicago truncatula
MTR_3g089055
N
0.753
Cucsa.079150
Cucumis sativus
Cucsa.079150
N
0.753
GSMUA_Achr10G17290_001
Musa acuminata
GSMUA_Achr10G17290_001
N
0.751
Ca_03920
Cicer arietinum
Ca_03920
N
0.751
Cla015267
Citrullus lanatus
Cla015267
N
0.745
SCL1
Arabidopsis lyrata
fgenesh2_kg.1__2335__AT1G21450.1
N
0.743
GLYMA14G27290
Glycine max
GLYMA14G27290
N
0.741
GSMUA_Achr3G02410_001
Musa acuminata
GSMUA_Achr3G02410_001
N
0.740
Bra017915
Brassica rapa
Bra017915
N
0.738
GLYMA13G09220
Glycine max
GLYMA13G09220
N
0.738
Thhalv10007142m.g
Eutrema salsugineum
Thhalv10007142m.g
N
0.737
SCL1
Arabidopsis thaliana
AT1G21450
N
0.735
AMTR_s00186p00018500
Amborella trichopoda
AMTR_s00186p00018500
N
0.732
Bo5g034360
Brassica oleracea
Bo5g034360
N
0.732
mgf010500m
Mimulus guttatus
mgf010500m
N
0.732
Cagra.1632s0036
Capsella grandiflora
Cagra.1632s0036
N
0.732
PGSC0003DMG400024853
Solanum tuberosum
PGSC0003DMG400024853
N
0.729
Bostr.25570s0024
Boechera stricta
Bostr.25570s0024
N
0.729
Solyc04g064550.1
Solanum lycopersicum
Solyc04g064550.1
N
0.726
Carubv10008658m.g
Capsella rubella
Carubv10008658m.g
N
0.722
Bo7g059410
Brassica oleracea
Bo7g059410
N
0.717
Bra012280
Brassica rapa
Bra012280
N
0.714
Ca_13102
Cicer arietinum
Ca_13102
N
0.704