CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0359s0250
(
Salix purpurea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
SapurV1A.0359s0250
T203148_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0359s0250.1.p
GRAS
176
546
LKQVLLACADAVSNADIQRAAGLMHVLDQMVSVSGEPIQRLGAYMLEGLRARLELSGSKIYRALKCEAPISSDLMTYMGILYQICPYWKFAYTSANVVIREAVEYESRIHIIDFQIAQGSQWILLMQMLACRPGGPPAIRITGVDDSQSAHARGGGLDIVGHRLSKVAESCNVPFEFHDVAMDGCEVQLEHLRVQSGEAVVVNFPYVLHHMPDESVNTWNHRDRLIRMMKSLSPRIVTLVEQESNTNTKPFFPRFIETLDYYTAMFESIAAGGSKDVKQRINAEQQCVARDIVNMIACEEAERVERHELLAKWRSRFTMAGFNQYPLSSSTTTAVKDLLKEYDRNYSVQERDRALYLRWRNRDMATSSAWQ
SapurV1A.0359s0250.2.p
GRAS
139
509
LKQVLLACADAVSNADIQRAAGLMHVLDQMVSVSGEPIQRLGAYMLEGLRARLELSGSKIYRALKCEAPISSDLMTYMGILYQICPYWKFAYTSANVVIREAVEYESRIHIIDFQIAQGSQWILLMQMLACRPGGPPAIRITGVDDSQSAHARGGGLDIVGHRLSKVAESCNVPFEFHDVAMDGCEVQLEHLRVQSGEAVVVNFPYVLHHMPDESVNTWNHRDRLIRMMKSLSPRIVTLVEQESNTNTKPFFPRFIETLDYYTAMFESIAAGGSKDVKQRINAEQQCVARDIVNMIACEEAERVERHELLAKWRSRFTMAGFNQYPLSSSTTTAVKDLLKEYDRNYSVQERDRALYLRWRNRDMATSSAWQ
Links
Other
GRAS
family TFs
Other
Salix purpurea
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0006s01720
Populus trichocarpa
POPTR_0006s01720
N
0.949
SapurV1A.0823s0110
Salix purpurea
SapurV1A.0823s0110
N
0.935
POPTR_0016s01110
Populus trichocarpa
POPTR_0016s01110
N
0.932
27529.m000047
Ricinus communis
27529.m000047
N
0.802
Lus10017554.g
Linum usitatissimum
Lus10017554.g
N
0.780
Lus10000539.g
Linum usitatissimum
Lus10000539.g
N
0.778
Ciclev10014811m.g
Citrus clementina
Ciclev10014811m.g
N
0.756
orange1.1g008984m.g
Citrus sinensis
orange1.1g008984m.g
N
0.753
TCM_030393
Theobroma cacao
TCM_030393
N
0.751
Eucgr.D01435
Eucalyptus grandis
Eucgr.D01435
N
0.743
SCL13
Vitis vinifera
VIT_00s0463g00020
N
0.743
Gorai.009G184100
Gossypium raimondii
Gorai.009G184100
N
0.729
GLYMA09G01440
Glycine max
GLYMA09G01440
N
0.721
GLYMA15G12320
Glycine max
GLYMA15G12320
N
0.721
SCL13
Arabidopsis lyrata
fgenesh2_kg.7__2586__AT4G17230.1
N
0.721
evm.TU.supercontig_27.254
Carica papaya
evm.TU.supercontig_27.254
N
0.712
MDP0000254936
Malus domestica
MDP0000254936
N
0.705
Gorai.010G249400
Gossypium raimondii
Gorai.010G249400
N
0.702
Pm012494
Prunus mume
Pm012494
N
0.702