Thhalv10005482m.g (Eutrema salsugineum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Thhalv10005482m.g T203191_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10005482m GRAS 251 611

Links

Other GRAS family TFs
Other Eutrema salsugineum TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N 0.972
Cagra.2235s0013 Capsella grandiflora Cagra.2235s0013 N 0.964
Bra024875 Brassica rapa Bra024875 N 0.958
RGA Arabidopsis thaliana AT2G01570 N 0.955
Bo7g078550 Brassica oleracea Bo7g078550 N 0.955
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N 0.953
Carubv10018534m.g Capsella rubella Carubv10018534m.g N 0.925
GAI Arabidopsis thaliana AT1G14920 N 0.880
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.877
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.877
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N 0.877
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.874
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N 0.874
Bo9g070200 Brassica oleracea Bo9g070200 N 0.869
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.866
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.863
29692.m000540 Ricinus communis 29692.m000540 N 0.863
TCM_010965 Theobroma cacao TCM_010965 N 0.855
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.849
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.846
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.846
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.844
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.844
PK14700.1 Cannabis sativa PK14700.1 N 0.841
Cucsa.280310 Cucumis sativus Cucsa.280310 N 0.841
Bra017443 Brassica rapa Bra017443 N 0.841
Cla003996 Citrullus lanatus Cla003996 N 0.838
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.835
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.832
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.824
Pm006304 Prunus mume Pm006304 N 0.816
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.813
GLYMA05G27190 Glycine max GLYMA05G27190 N 0.813
MDP0000237978 Malus domestica MDP0000237978 N 0.802
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.799
Ca_05046 Cicer arietinum Ca_05046 N 0.793
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N 0.790
Ciclev10017466m.g Citrus clementina Ciclev10017466m.g N 0.788
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.774
mgf008289m Mimulus guttatus mgf008289m N 0.771
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.771
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.768
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.767
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.763
Pm014329 Prunus mume Pm014329 I 0.763
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.763
MDP0000669451 Malus domestica MDP0000669451 I 0.763
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.763
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.760
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.760
28677.m000055 Ricinus communis 28677.m000055 N 0.757
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.752
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.749
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.749
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.747
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.744
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.744
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.743
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.743
Cla020062 Citrullus lanatus Cla020062 N 0.740
Cucsa.006260 Cucumis sativus Cucsa.006260 N 0.740
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.740
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.740
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.735
Ca_13295 Cicer arietinum Ca_13295 I 0.735
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.723
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.721
mgf025772m Mimulus guttatus mgf025772m N 0.718
TCM_019165 Theobroma cacao TCM_019165 N 0.710