Thhalv10010179m.g (Eutrema salsugineum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Thhalv10010179m.g T203197_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10010179m GRAS 293 653

Links

Other GRAS family TFs
Other Eutrema salsugineum TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo8g083500 Brassica oleracea Bo8g083500 N 0.994
Carubv10016802m.g Capsella rubella Carubv10016802m.g N 0.992
SCR Arabidopsis lyrata fgenesh2_kg.5__1811__AT3G54220.1 N 0.992
Cagra.0562s0013 Capsella grandiflora Cagra.0562s0013 N 0.992
Bostr.0697s0034 Boechera stricta Bostr.0697s0034 N 0.992
SCR Arabidopsis thaliana AT3G54220 N 0.992
evm.TU.supercontig_1018.1 Carica papaya evm.TU.supercontig_1018.1 N 0.911
Ciclev10011085m.g Citrus clementina Ciclev10011085m.g N 0.905
orange1.1g014896m.g Citrus sinensis orange1.1g014896m.g N 0.905
cassava25218.valid.m1 Manihot esculenta cassava25218.valid.m1 N 0.903
30073.m002204 Ricinus communis 30073.m002204 N 0.900
TCM_017746 Theobroma cacao TCM_017746 N 0.897
cassava36326.valid.m1 Manihot esculenta cassava36326.valid.m1 N 0.894
SCR Vitis vinifera VIT_08s0056g00050 N 0.888
PRUPE_ppa001546mg Prunus persica PRUPE_ppa001546mg N 0.886
gene13644-v1.0-hybrid Fragaria vesca gene13644-v1.0-hybrid N 0.884
Pm002956 Prunus mume Pm002956 N 0.884
POPTR_0016s15060 Populus trichocarpa POPTR_0016s15060 N 0.884
MDP0000397638 Malus domestica MDP0000397638 N 0.881
SapurV1A.0208s0090 Salix purpurea SapurV1A.0208s0090 N 0.881
Eucgr.K01320 Eucalyptus grandis Eucgr.K01320 N 0.875
Cla012346 Citrullus lanatus Cla012346 N 0.875
POPTR_0006s11500 Populus trichocarpa POPTR_0006s11500 N 0.875
Cucsa.002880 Cucumis sativus Cucsa.002880 N 0.873
chr1.CM1255.400.nc Lotus japonicus chr1.CM1255.400.nc N 0.867
Gorai.006G236200 Gossypium raimondii Gorai.006G236200 N 0.867
Solyc10g074680.1 Solanum lycopersicum Solyc10g074680.1 N 0.864
SapurV1A.1165s0100 Salix purpurea SapurV1A.1165s0100 N 0.864
Bra007056 Brassica rapa Bra007056 N 0.862
GLYMA18G45220 Glycine max GLYMA18G45220 N 0.862
MTR_7g074650 Medicago truncatula MTR_7g074650 N 0.862
GLYMA09G40620 Glycine max GLYMA09G40620 N 0.862
PGSC0003DMG400016833 Solanum tuberosum PGSC0003DMG400016833 N 0.859
Ca_09530 Cicer arietinum Ca_09530 N 0.853
Gorai.005G001300 Gossypium raimondii Gorai.005G001300 N 0.852
Aquca_004_00566 Aquilegia coerulea Aquca_004_00566 N 0.848
mgf012242m Mimulus guttatus mgf012242m N 0.845
LPERR11G01220 Leersia perrieri LPERR11G01220 N 0.812
GRMZM2G131516 Zea mays GRMZM2G131516 N 0.811
GSMUA_Achr8G09400_001 Musa acuminata GSMUA_Achr8G09400_001 N 0.803
Lus10016496.g Linum usitatissimum Lus10016496.g N 0.795
Sb05g001500 Sorghum bicolor Sb05g001500 N 0.792
OGLUM11G01180 Oryza glumaepatula OGLUM11G01180 N 0.792
OBART12G01190 Oryza barthii OBART12G01190 N 0.792
LPERR12G01340 Leersia perrieri LPERR12G01340 N 0.789
Lus10040734.g Linum usitatissimum Lus10040734.g N 0.789
ORUFI12G01460 Oryza rufipogon ORUFI12G01460 N 0.787
BGIOSGA034703 Oryza indica BGIOSGA034703 N 0.787
SCR1 Oryza sativa OS11G0124300 N 0.787
SCR2 Oryza sativa OS12G0122000 N 0.787
BGIOSGA036912 Oryza indica BGIOSGA036912 N 0.787
Pavir.J21588 Panicum virgatum Pavir.J21588 N 0.786
F775_14336 Aegilops tauschii F775_14336 N 0.785
AMTR_s00077p00190160 Amborella trichopoda AMTR_s00077p00190160 N 0.781
Traes_5BL_C02570726 Triticum aestivum Traes_5BL_C02570726 N 0.776
OBART11G01460 Oryza barthii OBART11G01460 N 0.770
Traes_4DS_2CE9E3235 Triticum aestivum Traes_4DS_2CE9E3235 N 0.767
Traes_4BS_A05D3DC53 Triticum aestivum Traes_4BS_A05D3DC53 N 0.767
ORGLA12G0010300 Oryza glaberrima ORGLA12G0010300 N 0.767
MLOC_64716 Hordeum vulgare MLOC_64716 N 0.765
ORGLA11G0013300 Oryza glaberrima ORGLA11G0013300 N 0.764
ORUFI11G01380 Oryza rufipogon ORUFI11G01380 N 0.759
Pavir.J08573 Panicum virgatum Pavir.J08573 N 0.756
GRMZM2G015080 Zea mays GRMZM2G015080 N 0.754
Pavir.Ha01915 Panicum virgatum Pavir.Ha01915 N 0.731
SELMODRAFT_432115 Selaginella moellendorffii SELMODRAFT_432115 N 0.730
OB07G24850 Oryza brachyantha OB07G24850 N 0.719
OS07G0567700 Oryza sativa OS07G0567700 N 0.719