Thhalv10011379m.g (Eutrema salsugineum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Thhalv10011379m.g T203200_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10011379m GRAS 163 533

Links

Other GRAS family TFs
Other Eutrema salsugineum TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra026077 Brassica rapa Bra026077 N 0.979
Bo6g022330 Brassica oleracea Bo6g022330 N 0.978
Bra018860 Brassica rapa Bra018860 N 0.978
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.973
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.973
SCL5 Arabidopsis thaliana AT1G50600 N 0.970
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.957
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.957
Bo5g079990 Brassica oleracea Bo5g079990 N 0.938
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.767
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N 0.762
TCM_030733 Theobroma cacao TCM_030733 N 0.762
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.751
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.748
27613.m000642 Ricinus communis 27613.m000642 N 0.743
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.737
Pm012019 Prunus mume Pm012019 N 0.737
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.732
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.732
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.732
MDP0000152670 Malus domestica MDP0000152670 N 0.726
TCM_002319 Theobroma cacao TCM_002319 N 0.726
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.726
MDP0000804652 Malus domestica MDP0000804652 N 0.724
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.724
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.724
Pm015021 Prunus mume Pm015021 N 0.724
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.724
MDP0000205236 Malus domestica MDP0000205236 N 0.721
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.721
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.721
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.721
MDP0000284679 Malus domestica MDP0000284679 N 0.721
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.721
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.718
PK15082.1 Cannabis sativa PK15082.1 N 0.718
PAT1 Arabidopsis thaliana AT5G48150 N 0.715
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.715
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.715
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.713
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.713
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.713
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.713
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.713
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.711
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.710
29949.m000124 Ricinus communis 29949.m000124 N 0.710
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.710
Ca_09786 Cicer arietinum Ca_09786 N 0.710
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.707
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.707
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.707
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.707
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.707
Lus10003772.g Linum usitatissimum Lus10003772.g N 0.704
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.702
Cla001429 Citrullus lanatus Cla001429 N 0.702
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.702
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.702
CIGR2 Oryza sativa OS07G0583600 N 0.701