CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10024885m.g
(
Eutrema salsugineum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Thhalv10024885m.g
T203215_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10024885m
GRAS
145
532
ADSILLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGERCYRTMVTAAATEKTCSFESTRKTVLKFQEVSPWATFGHVAANGAILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASHRMMKEIGNRMEKFARLMGVPFKFSIIHHVGDLSEFDLNELDIKSDEVLAVNCVGTMHGIAPRGNPRNAVISNFRRLRPRIFTVVEEEADLAGEEQEGFDDDQFLRGFGECLRWSRVCFESLEESFPRTSNERLMLERAAGRAIVDLVACEPSDSTERRETARKWSRRMRNGGFGAVGYSDEVADDVRALLRRYKEGVWSMVQCSDAAGIFLCWRDQPVVWASAWR
Links
Other
GRAS
family TFs
Other
Eutrema salsugineum
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SHR
Arabidopsis lyrata
scaffold_700314.1
N
0.959
Carubv10004568m.g
Capsella rubella
Carubv10004568m.g
N
0.954
Bostr.7867s1625
Boechera stricta
Bostr.7867s1625
N
0.951
SHR
Arabidopsis thaliana
AT4G37650
N
0.951
Bo1g003500
Brassica oleracea
Bo1g003500
N
0.913
Bra011777
Brassica rapa
Bra011777
N
0.908
Bra017842
Brassica rapa
Bra017842
N
0.905
Bo7g118650
Brassica oleracea
Bo7g118650
N
0.902
Bo3g153360
Brassica oleracea
Bo3g153360
N
0.881
Bra010606
Brassica rapa
Bra010606
N
0.875