chr1.CM0794.360.nd (Lotus japonicus)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 chr1.CM0794.360.nd T203269_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.CM0794.360.nd GRAS 10 116

Links

Other GRAS family TFs
Other Lotus japonicus TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.953
GLYMA12G02490 Glycine max GLYMA12G02490 N 0.840
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.840
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.840
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.821
LjSGA_017153.1 Lotus japonicus LjSGA_017153.1 N 0.821
Ca_27441 Cicer arietinum Ca_27441 N 0.821
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.802
Pm012190 Prunus mume Pm012190 N 0.802
TCM_040833 Theobroma cacao TCM_040833 N 0.792
MTR_4g076140 Medicago truncatula MTR_4g076140 N 0.783
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.783
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.774
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N 0.774
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N 0.764
Bra018848 Brassica rapa Bra018848 N 0.764
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.755
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.755
SCL3 Arabidopsis thaliana AT1G50420 N 0.755
Bo3g179450 Brassica oleracea Bo3g179450 N 0.755
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.755
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.745
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.745
Lus10009717.g Linum usitatissimum Lus10009717.g N 0.736
Cla006433 Citrullus lanatus Cla006433 N 0.726
Cucsa.055340 Cucumis sativus Cucsa.055340 N 0.726
GSMUA_Achr8G09690_001 Musa acuminata GSMUA_Achr8G09690_001 N 0.708
30131.m007244 Ricinus communis 30131.m007244 N 0.708