chr3.CM0460.360.nd (Lotus japonicus)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 chr3.CM0460.360.nd T203277_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr3.CM0460.360.nd GRAS 79 440

Links

Other GRAS family TFs
Other Lotus japonicus TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_11130 Cicer arietinum Ca_11130 N 0.950
GLYMA11G10220 Glycine max GLYMA11G10220 N 0.948
MTR_4g076020 Medicago truncatula MTR_4g076020 N 0.917
GLYMA12G02530 Glycine max GLYMA12G02530 N 0.914
POPTR_0016s02030 Populus trichocarpa POPTR_0016s02030 N 0.895
PRUPE_ppa005742mg Prunus persica PRUPE_ppa005742mg N 0.889
cassava29451.valid.m1 Manihot esculenta cassava29451.valid.m1 N 0.889
POPTR_0006s02220 Populus trichocarpa POPTR_0006s02220 N 0.887
Pm014866 Prunus mume Pm014866 N 0.887
SapurV1A.0295s0450 Salix purpurea SapurV1A.0295s0450 N 0.884
29872.m000537 Ricinus communis 29872.m000537 N 0.881
TCM_002021 Theobroma cacao TCM_002021 N 0.876
gene24339-v1.0-hybrid Fragaria vesca gene24339-v1.0-hybrid N 0.876
PK21090.1 Cannabis sativa PK21090.1 N 0.870
MDP0000287321 Malus domestica MDP0000287321 N 0.870
Ciclev10011732m.g Citrus clementina Ciclev10011732m.g N 0.870
MDP0000269044 Malus domestica MDP0000269044 N 0.867
MDP0000289554 Malus domestica MDP0000289554 N 0.867
VIT_03s0017g01660 Vitis vinifera VIT_03s0017g01660 N 0.865
SapurV1A.0154s0180 Salix purpurea SapurV1A.0154s0180 N 0.865
Eucgr.A00903 Eucalyptus grandis Eucgr.A00903 N 0.851
evm.TU.supercontig_8.295 Carica papaya evm.TU.supercontig_8.295 N 0.851
Gorai.004G063200 Gossypium raimondii Gorai.004G063200 N 0.845
Cla005525 Citrullus lanatus Cla005525 N 0.845
Cucsa.180010 Cucumis sativus Cucsa.180010 N 0.845
orange1.1g013903m.g Citrus sinensis orange1.1g013903m.g N 0.843
Solyc07g043330.1 Solanum lycopersicum Solyc07g043330.1 N 0.787
OS07G0567700 Oryza sativa OS07G0567700 N 0.779
PGSC0003DMG400011742 Solanum tuberosum PGSC0003DMG400011742 N 0.778
Aquca_030_00364 Aquilegia coerulea Aquca_030_00364 N 0.773
OPUNC07G17970 Oryza punctata OPUNC07G17970 N 0.754
OPUNC07G18000 Oryza punctata OPUNC07G18000 N 0.754
ORGLA07G0244600 Oryza glaberrima ORGLA07G0244600 N 0.754
BGIOSGA025964 Oryza indica BGIOSGA025964 N 0.754
OGLUM07G18870 Oryza glumaepatula OGLUM07G18870 N 0.754
ONIVA07G17430 Oryza nivara ONIVA07G17430 N 0.754
ORUFI07G19860 Oryza rufipogon ORUFI07G19860 N 0.754
OMERI07G15800 Oryza meridionalis OMERI07G15800 N 0.751
OB07G24850 Oryza brachyantha OB07G24850 N 0.750
LPERR11G01220 Leersia perrieri LPERR11G01220 N 0.750
LPERR07G16410 Leersia perrieri LPERR07G16410 N 0.746
OBART07G19080 Oryza barthii OBART07G19080 N 0.743
Pavir.Ba00637 Panicum virgatum Pavir.Ba00637 N 0.740
Sb02g036680 Sorghum bicolor Sb02g036680 N 0.737
Pavir.Bb03100 Panicum virgatum Pavir.Bb03100 N 0.727
BRADI1G24310 Brachypodium distachyon BRADI1G24310 N 0.725
SCL23 Arabidopsis thaliana AT5G41920 N 0.724
MLOC_62589 Hordeum vulgare MLOC_62589 N 0.724
fgenesh2_kg.7__3225__AT5G41920.1 Arabidopsis lyrata fgenesh2_kg.7__3225__AT5G41920.1 N 0.724
Si032551m.g Setaria italica Si032551m.g N 0.721
GRMZM2G106548 Zea mays GRMZM2G106548 N 0.718
Cagra.6263s0002 Capsella grandiflora Cagra.6263s0002 N 0.716
Traes_2BS_015167E00 Triticum aestivum Traes_2BS_015167E00 N 0.716
Thhalv10027784m.g Eutrema salsugineum Thhalv10027784m.g N 0.713
Bostr.17016s0016 Boechera stricta Bostr.17016s0016 N 0.713
Carubv10004949m.g Capsella rubella Carubv10004949m.g N 0.713
GRMZM2G131516 Zea mays GRMZM2G131516 N 0.712
Bostr.25375s0003 Boechera stricta Bostr.25375s0003 N 0.708
Bo4g143710 Brassica oleracea Bo4g143710 N 0.701