CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chr3.CM0792.420.nd
(
Lotus japonicus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
chr3.CM0792.420.nd
T203279_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr3.CM0792.420.nd
GRAS
267
636
LWTLLTQCAQAVASYDQRNASEILKQIRDNSSPFGDGLQRLAHYVANGLETRLFAGTPKYTLLQSSSAADMLKAYKVYITASPFWRMTNFLANRTILKLVQNVSSVHIIDFGIFYGFQWPCLIQRLSERPGGPPKLRITGIDLPQPGFRPTERVEETGWRLAKYCKRFGVPFEYNFLAQKWETIRLEDLKIDMEEEVTVVNCLYRLKNLSDETVTVNCPRDAVLKLIRRVNPNIFIHGVINGTYNAPFFLTRFREALFHFSSLFDMFEATVPREDKYRLMFEEGLFGRDAVNVIACEGAERVERPETYKQWQVRNRRAGFKQLPLAPELSSRVKEMVKKEYHKDFVVDEDGKWVLQGWKGRILHAVSCWV
Links
Other
GRAS
family TFs
Other
Lotus japonicus
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_4g064200
Medicago truncatula
MTR_4g064200
N
0.877
Ca_16293
Cicer arietinum
Ca_16293
N
0.877
GLYMA12G06630
Glycine max
GLYMA12G06630
N
0.831
GLYMA11G14670
Glycine max
GLYMA11G14670
N
0.826
Ca_02626
Cicer arietinum
Ca_02626
N
0.760
GLYMA15G04160
Glycine max
GLYMA15G04160
N
0.755
GLYMA13G41261
Glycine max
GLYMA13G41261
N
0.752
GLYMA15G04166
Glycine max
GLYMA15G04166
N
0.747
MTR_2g097467
Medicago truncatula
MTR_2g097467
N
0.744
MTR_2g097473
Medicago truncatula
MTR_2g097473
N
0.744
MTR_2g097463
Medicago truncatula
MTR_2g097463
N
0.741
PRUPE_ppa002166mg
Prunus persica
PRUPE_ppa002166mg
N
0.706
Pm000712
Prunus mume
Pm000712
N
0.702