CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chr4.CM0165.310.nd
(
Lotus japonicus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
chr4.CM0165.310.nd
T203281_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr4.CM0165.310.nd
GRAS
183
238
FIEELIRAADCFDSNQLQLAQAILERLNQRLRSPSGKPLHRAAFHFKDALQSLCPA
Links
Other
GRAS
family TFs
Other
Lotus japonicus
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_8g077940
Medicago truncatula
MTR_8g077940
N
0.891
Ca_16043
Cicer arietinum
Ca_16043
N
0.873
GLYMA16G25570
Glycine max
GLYMA16G25570
N
0.836
LjSGA_023918.1
Lotus japonicus
LjSGA_023918.1
N
0.800
GLYMA02G06530
Glycine max
GLYMA02G06530
N
0.800
GLYMA11G06980
Glycine max
GLYMA11G06980
N
0.782
GLYMA01G38360
Glycine max
GLYMA01G38360
N
0.782
POPTR_0007s12480
Populus trichocarpa
POPTR_0007s12480
N
0.782
SapurV1A.0817s0080
Salix purpurea
SapurV1A.0817s0080
N
0.764
Gorai.003G016500
Gossypium raimondii
Gorai.003G016500
N
0.745
gene29558-v1.0-hybrid
Fragaria vesca
gene29558-v1.0-hybrid
N
0.745
orange1.1g048701m.g
Citrus sinensis
orange1.1g048701m.g
N
0.745
Ciclev10025246m.g
Citrus clementina
Ciclev10025246m.g
N
0.745
MDP0000139971
Malus domestica
MDP0000139971
N
0.745
POPTR_0005s12730
Populus trichocarpa
POPTR_0005s12730
N
0.745
SapurV1A.0255s0090
Salix purpurea
SapurV1A.0255s0090
N
0.727
Pm026588
Prunus mume
Pm026588
N
0.727
TCM_000435
Theobroma cacao
TCM_000435
N
0.727
VIT_04s0023g01380
Vitis vinifera
VIT_04s0023g01380
N
0.727
Lus10024029.g
Linum usitatissimum
Lus10024029.g
N
0.727
Lus10041721.g
Linum usitatissimum
Lus10041721.g
N
0.727