CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LjSGA_023918.1
(
Lotus japonicus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
LjSGA_023918.1
T203301_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LjSGA_023918.1
GRAS
5
361
IIEDLIRAADCFDTNQLQPAQMILERLNHRLRSPTGKPLQRAAFHFKDALQSLLSGSNPPRVSSMVEIVHGMRTFKAFSGISPIPMFSIFTTNQALLESLIHSSSCFLHIIDFEIGLGIQYASLMKEIAEKVETGKIGSPVLRITAVVPEEYAVESTLVRENLVQFAQELRIRVQVEFVSLRTFETVSFKAVKFVDGERTAVLLSPAIFRRLGSAAAFMADVRSVSPCVVVFVDEEGWAEAAAEASFRRGVVSSLEFYSMMLESLDASVVSGGGGEWVKRIEMLLLRPKMMAAVDSAGRRMPPWREAFYCAGMRPVQLSQFADFQAECLLAKSQIRGFHVAKRQAELVLFWHERAMV
Links
Other
GRAS
family TFs
Other
Lotus japonicus
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
chr4.CM0165.310.nd
Lotus japonicus
chr4.CM0165.310.nd
N
0.800
GLYMA01G38360
Glycine max
GLYMA01G38360
N
0.797
MTR_8g077940
Medicago truncatula
MTR_8g077940
N
0.795
Ca_16043
Cicer arietinum
Ca_16043
N
0.787
GLYMA11G06980
Glycine max
GLYMA11G06980
N
0.772
GLYMA16G25570
Glycine max
GLYMA16G25570
N
0.768
GLYMA02G06530
Glycine max
GLYMA02G06530
N
0.742