LjT40K11.90.nc (Lotus japonicus)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 LjT40K11.90.nc T203326_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
LjT40K11.90.nc GRAS 223 585

Links

Other GRAS family TFs
Other Lotus japonicus TFs

93 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.741
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.738
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N 0.738
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N 0.733
RGL2 Arabidopsis lyrata fgenesh2_kg.3__292__AT3G03450.1 I 0.724
RGA Arabidopsis thaliana AT2G01570 N 0.735
GAI Arabidopsis thaliana AT1G14920 N 0.730
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N 0.744
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N 0.735
BRADI1G11090 Brachypodium distachyon BRADI1G11090 N 0.708
Bo7g078550 Brassica oleracea Bo7g078550 N 0.744
Bra024875 Brassica rapa Bra024875 N 0.744
PK14700.1 Cannabis sativa PK14700.1 N 0.780
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.727
Cagra.2235s0013 Capsella grandiflora Cagra.2235s0013 N 0.741
Cagra.2098s0043 Capsella grandiflora Cagra.2098s0043 I 0.702
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.727
Carubv10015212m.g Capsella rubella Carubv10015212m.g I 0.708
Carubv10018534m.g Capsella rubella Carubv10018534m.g N 0.705
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.772
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.805
Ca_13295 Cicer arietinum Ca_13295 I 0.847
Ca_05046 Cicer arietinum Ca_05046 N 0.747
Cla003996 Citrullus lanatus Cla003996 N 0.741
Cla020062 Citrullus lanatus Cla020062 N 0.799
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.825
Ciclev10017466m.g Citrus clementina Ciclev10017466m.g N 0.716
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N 0.716
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.819
Cucsa.280310 Cucumis sativus Cucsa.280310 N 0.741
Cucsa.006260 Cucumis sativus Cucsa.006260 N 0.786
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.813
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.760
Thhalv10005482m.g Eutrema salsugineum Thhalv10005482m.g N 0.744
Thhalv10015535m.g Eutrema salsugineum Thhalv10015535m.g I 0.702
Thhalv10020431m.g Eutrema salsugineum Thhalv10020431m.g I 0.713
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.727
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.724
GLYMA05G27190 Glycine max GLYMA05G27190 N 0.719
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.869
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.872
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.772
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.763
MLOC_67940 Hordeum vulgare MLOC_67940 N 0.713
LPERR03G26000 Leersia perrieri LPERR03G26000 N 0.719
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.786
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.783
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 1.000
MDP0000237978 Malus domestica MDP0000237978 N 0.727
MDP0000669451 Malus domestica MDP0000669451 I 0.830
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.816
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.769
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.774
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.858
mgf025772m Mimulus guttatus mgf025772m N 0.708
mgf008289m Mimulus guttatus mgf008289m N 0.741
OBART03G31370 Oryza barthii OBART03G31370 N 0.716
OB03G38380 Oryza brachyantha OB03G38380 N 0.705
ORGLA03G0290200 Oryza glaberrima ORGLA03G0290200 N 0.716
OGLUM03G31610 Oryza glumaepatula OGLUM03G31610 N 0.704
SLR1 Oryza indica BGIOSGA013420 N 0.716
OMERI03G27970 Oryza meridionalis OMERI03G27970 N 0.716
ONIVA03G32670 Oryza nivara ONIVA03G32670 N 0.716
OPUNC03G28530 Oryza punctata OPUNC03G28530 N 0.704
ORUFI03G32650 Oryza rufipogon ORUFI03G32650 N 0.716
SLR1 Oryza sativa OS03G0707600 N 0.716
Pavir.Ib04357 Panicum virgatum Pavir.Ib04357 N 0.721
Pavir.Ia00840 Panicum virgatum Pavir.Ia00840 N 0.721
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.758
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.828
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.766
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.825
Pm014329 Prunus mume Pm014329 I 0.819
Pm006304 Prunus mume Pm006304 N 0.744
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.813
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.738
28677.m000055 Ricinus communis 28677.m000055 N 0.783
29692.m000540 Ricinus communis 29692.m000540 N 0.777
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.786
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.747
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.755
Si039400m.g Setaria italica Si039400m.g N 0.719
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.791
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.791
Sb01g010660 Sorghum bicolor Sb01g010660 N 0.708
TCM_010965 Theobroma cacao TCM_010965 N 0.783
TCM_019165 Theobroma cacao TCM_019165 N 0.760
Traes_4BS_2EE4988CD Triticum aestivum Traes_4BS_2EE4988CD N 0.713
Traes_4DS_ADBA6E30A Triticum aestivum Traes_4DS_ADBA6E30A N 0.715
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.766
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.816
GRMZM2G024973 Zea mays GRMZM2G024973 N 0.724
GRMZM2G144744 Zea mays GRMZM2G144744 N 0.717