PDK_20s1411471g003 (Phoenix dactylifera)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 PDK_20s1411471g003 T203340_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1411471g003 GRAS 8 378

Links

Other GRAS family TFs
Other Phoenix dactylifera TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27613.m000642 Ricinus communis 27613.m000642 N 0.772
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.767
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.767
TCM_002319 Theobroma cacao TCM_002319 N 0.762
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.759
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.759
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.759
29949.m000124 Ricinus communis 29949.m000124 N 0.758
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.756
Pm015021 Prunus mume Pm015021 N 0.753
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.753
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.753
MDP0000152670 Malus domestica MDP0000152670 N 0.753
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.753
TCM_030733 Theobroma cacao TCM_030733 N 0.753
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.751
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.751
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.751
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.748
MDP0000804652 Malus domestica MDP0000804652 N 0.748
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.748
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.748
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.745
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.745
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.743
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.743
Pm012019 Prunus mume Pm012019 N 0.743
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.743
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.740
Pavir.Ba00562 Panicum virgatum Pavir.Ba00562 N 0.740
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.740
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.738
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.737
Ca_09786 Cicer arietinum Ca_09786 N 0.737
OPUNC07G19030 Oryza punctata OPUNC07G19030 N 0.734
Si029418m.g Setaria italica Si029418m.g N 0.734
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.734
Sb02g037650 Sorghum bicolor Sb02g037650 N 0.732
Cla004565 Citrullus lanatus Cla004565 N 0.732
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.732
Traes_2BS_D007D6598 Triticum aestivum Traes_2BS_D007D6598 N 0.732
LPERR07G17460 Leersia perrieri LPERR07G17460 N 0.732
BRADI1G23350 Brachypodium distachyon BRADI1G23350 N 0.732
PK09018.1 Cannabis sativa PK09018.1 N 0.729
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.729
OMERI07G16830 Oryza meridionalis OMERI07G16830 N 0.729
OB07G25870 Oryza brachyantha OB07G25870 N 0.729
GRMZM2G431309 Zea mays GRMZM2G431309 N 0.729
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.726
OGLUM07G19910 Oryza glumaepatula OGLUM07G19910 N 0.726
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.726
BGIOSGA026022 Oryza indica BGIOSGA026022 N 0.726
MDP0000205236 Malus domestica MDP0000205236 N 0.726
PAT1 Arabidopsis thaliana AT5G48150 N 0.726
ONIVA07G18570 Oryza nivara ONIVA07G18570 N 0.726
MDP0000284679 Malus domestica MDP0000284679 N 0.726
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.726
ORUFI07G20980 Oryza rufipogon ORUFI07G20980 N 0.726
CIGR2 Oryza sativa OS07G0583600 N 0.726
ORGLA07G0258500 Oryza glaberrima ORGLA07G0258500 N 0.726
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.724
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.724
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.724
OBART07G20130 Oryza barthii OBART07G20130 N 0.724
Traes_2DS_CCA2FCCAD Triticum aestivum Traes_2DS_CCA2FCCAD N 0.724
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.724
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.724
F775_28371 Aegilops tauschii F775_28371 N 0.721
MLOC_65838 Hordeum vulgare MLOC_65838 N 0.721
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.721
Cla001429 Citrullus lanatus Cla001429 N 0.721
Pavir.Bb03224 Panicum virgatum Pavir.Bb03224 N 0.720
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.718
Traes_5BL_A7C4DAE11 Triticum aestivum Traes_5BL_A7C4DAE11 N 0.718
OMERI10G05450 Oryza meridionalis OMERI10G05450 N 0.716
Bo6g022330 Brassica oleracea Bo6g022330 N 0.715
F775_15940 Aegilops tauschii F775_15940 N 0.715
Bra018860 Brassica rapa Bra018860 N 0.715
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.713
SCL5 Arabidopsis thaliana AT1G50600 N 0.713
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.713
Bo2g149670 Brassica oleracea Bo2g149670 N 0.713
Bra020715 Brassica rapa Bra020715 N 0.713
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.713
Traes_5DL_B89CD8432 Triticum aestivum Traes_5DL_B89CD8432 N 0.710
OGLUM10G07400 Oryza glumaepatula OGLUM10G07400 N 0.710
OLONG_015869 Oryza longistaminata OLONG_015869 N 0.710
GRMZM2G098517 Zea mays GRMZM2G098517 N 0.710
ORGLA10G0063900 Oryza glaberrima ORGLA10G0063900 N 0.710
OBART10G07700 Oryza barthii OBART10G07700 N 0.710
ORUFI10G08100 Oryza rufipogon ORUFI10G08100 N 0.710
Bo9g009260 Brassica oleracea Bo9g009260 N 0.710
Cucsa.042310 Cucumis sativus Cucsa.042310 N 0.710
Lus10003772.g Linum usitatissimum Lus10003772.g N 0.708
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N 0.707
PK15082.1 Cannabis sativa PK15082.1 N 0.707
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.707
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.707
Bo7g089080 Brassica oleracea Bo7g089080 N 0.707
BGIOSGA032058 Oryza indica BGIOSGA032058 N 0.707
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.705
Bra036185 Brassica rapa Bra036185 N 0.705
OPUNC10G06730 Oryza punctata OPUNC10G06730 N 0.705
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.705
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.705
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.705
ONIVA10G07150 Oryza nivara ONIVA10G07150 N 0.705
OB10G15940 Oryza brachyantha OB10G15940 N 0.702
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.702
LPERR10G05390 Leersia perrieri LPERR10G05390 N 0.702
GSMUA_Achr8G03610_001 Musa acuminata GSMUA_Achr8G03610_001 N 0.701