CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GTF2IRD1
(
Gallus gallus
)
GTF2I-like
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02946 (GTF2I)
IPR004212
ENSGALG00000001263
T203420_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GTF2IRD1
M10618_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BEN_01
0.734
0.734
GTF2IRD1
M10619_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BEN_02
0.734
0.734
GTF2IRD1
M10620_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GTF2IRD1_01
0.734
0.734
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGALP00000001924
GTF2I-like
125
199
LRKMVEEVFDVLYSEAVGKSSVVPLPYERFLKEPGLLAVAGLPEGISFKKPMEYDVKSLMAILEHSHSIRFRLKR
ENSGALP00000001924
GTF2I-like
348
422
LRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIIGIPDKIPFKRPCTYGVPKLKRILEERHNIHFVIKR
ENSGALP00000001924
GTF2I-like
570
644
LRKQVEMLFNTRYAKAIGISEPVKVPYSKFLMYPEDLFVVGLPEGILLRRPNCFGIAKLKKILQASNNIQFVIKR
ENSGALP00000001924
GTF2I-like
699
773
LREQVQDLFNKKYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIKFTVTR
ENSGALP00000001924
GTF2I-like
796
826
LREQVKELFNEKYGEPPAFTLSRGLPVLPIG
ENSGALP00000001924
GTF2I-like
900
973
RQEIGQADTEQLREALGLNRPIMVPYKLIRDSPDAVEVTGLPDDIPFRNPNTYDIHRLEKILKARESIRMVIIN
Links
Other
GTF2I-like
family TFs
Other
Gallus gallus
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSFALG00000007085
Ficedula albicollis
ENSFALG00000007085
N
0.898
Gtf2ird1
Mus musculus
ENSMUSG00000023079
I
0.863
LOC100912262
Rattus norvegicus
ENSRNOG00000050193
I
0.861
Gtf2ird1
Rattus norvegicus
ENSRNOG00000001478
I
0.861
ENSAPLG00000006811
Anas platyrhynchos
ENSAPLG00000006811
I
0.791
Aan_R007261
Calypte anna
Aan_R007261
I
0.789
Brh_R010572
Buceros rhinoceros
Brh_R010572
I
0.789
Afo_R005311
Aptenodytes forsteri
Afo_R005311
I
0.786
GTF2IRD1
Ornithorhynchus anatinus
ENSOANG00000006511
N
0.783
Gfo_R013537
Geospiza fortis
Gfo_R013537
I
0.781
Alligator_sinensis_CCG003099.1
Alligator sinensis
Alligator_sinensis_CCG003099.1
I
0.779
GTF2IRD1
Taeniopygia guttata
ENSTGUG00000003638
I
0.779
Tal_R007678
Tyto alba
Tal_R007678
I
0.774
ENSPSIG00000012562
Pelodiscus sinensis
ENSPSIG00000012562
I
0.759
ENSONIG00000013267
Oreochromis niloticus
ENSONIG00000013267
N
0.746
GTF2IRD1
Meleagris gallopavo
ENSMGAG00000016801
I
0.741
GTF2IRD1
Sus scrofa
ENSSSCG00000007720
I
0.739
ENSOARG00000011517
Ovis aries
ENSOARG00000011517
I
0.739
GTF2IRD1
Bos taurus
ENSBTAG00000006212
I
0.739
GTF2IRD1
Equus caballus
ENSECAG00000019745
I
0.736
Cmyd_10014806
Chelonia mydas
Cmyd_10014806
I
0.736
GTF2IRD1
Myotis lucifugus
ENSMLUG00000001668
I
0.736
Myotis_brandtii_GTF2IRD1_10014286
Myotis brandtii
Myotis_brandtii_GTF2IRD1_10014286
I
0.736
GTF2IRD1
Homo sapiens
ENSG00000006704
D
0.734
GTF2IRD1
Felis catus
ENSFCAG00000006551
I
0.734
ENSAMEG00000015311
Ailuropoda melanoleuca
ENSAMEG00000015311
I
0.734
GTF2IRD1
Dasypus novemcinctus
ENSDNOG00000024296
I
0.734
ENSPPYG00000017485
Pongo abelii
ENSPPYG00000017485
I
0.734
GTF2IRD1
Pan troglodytes
ENSPTRG00000019292
I
0.734
GTF2IRD1
Canis familiaris
ENSCAFG00000011763
I
0.734
GTF2IRD1
Macaca mulatta
ENSMMUG00000018842
I
0.734
GTF2IRD1
Cavia porcellus
ENSCPOG00000004421
I
0.729
ENSSTOG00000014343
Ictidomys tridecemlineatus
ENSSTOG00000014343
I
0.729
GTF2IRD1
Oryctolagus cuniculus
ENSOCUG00000026916
I
0.729
ENSMEUG00000012139
Macropus eugenii
ENSMEUG00000012139
I
0.726
ENSMPUG00000016153
Mustela putorius furo
ENSMPUG00000016153
I
0.721
GTF2IRD1
Gorilla gorilla
ENSGGOG00000000419
N
0.709