CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLACG00000018407
(
Latimeria chalumnae
)
GTF2I-like
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02946 (GTF2I)
IPR004212
ENSLACG00000018407
T203429_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GTF2IRD1
M10618_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BEN_01
0.819
0.819
GTF2IRD1
M10619_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BEN_02
0.819
0.819
GTF2IRD1
M10620_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GTF2IRD1_01
0.819
0.819
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLACP00000020950
GTF2I-like
125
199
LRRMVEEVFDVLYSEAVGKTTLVPVPYDRILKDPSSLLVQGLPEGIGFRKPSDYDAKTLMKILEQSHRLRFKVKR
ENSLACP00000020950
GTF2I-like
351
425
LRECVQILFNSRYAEALGLDHIVPVPYRKIACDPEAVEIIGIPDKIPFKRPCTYGVPKLKRILEERHNISFVIKR
ENSLACP00000020950
GTF2I-like
567
641
LRKQVEALYNAKYAEAMGLSEPVKVPYPKFQMYPQDLYMEGLPAGISLRRPSCLGITKLQQILEASNAIQFVIKR
ENSLACP00000020950
GTF2I-like
706
780
LREQVQDLFNRKYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQNLERILTVADKIKFTVMR
ENSLACP00000020950
GTF2I-like
803
877
LREQVKELFNEKYGEALGLNRHVMVPYKLIRDNPDAVEVSGLPDGIPFKNPNTYDITRLEKILQARELIRMVVKS
Links
Other
GTF2I-like
family TFs
Other
Latimeria chalumnae
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy