CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GTF2IRD1
(
Meleagris gallopavo
)
GTF2I-like
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02946 (GTF2I)
IPR004212
ENSMGAG00000016801
T203439_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GTF2IRD1
M10618_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BEN_01
0.733
0.733
GTF2IRD1
M10619_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BEN_02
0.733
0.733
GTF2IRD1
M10620_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GTF2IRD1_01
0.733
0.733
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMGAP00000017968
GTF2I-like
125
198
LRKMVEEVFDVLYSEAVGKSSVVPLPYERFLKEPGLLAVAGLPEGISFKPMEYDVKSLMAILEHSHSIRFRLKR
ENSMGAP00000017968
GTF2I-like
346
420
LRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIIGIPDKIPFKRPCTYGVPKLKRILEERHNIHFVIKR
ENSMGAP00000017968
GTF2I-like
568
642
LRKQVEILFNTRYAKAIGISEPVKVPYSKFLMYPEDLFVVGLPEGILLRRPNCFGIAKLKKILQASNNIQFVIKR
ENSMGAP00000017968
GTF2I-like
697
771
LREQVQDLFNKKYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIKFTVTR
Links
Other
GTF2I-like
family TFs
Other
Meleagris gallopavo
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Tal_R007678
Tyto alba
Tal_R007678
I
0.937
ENSP00000397566
Macaca fascicularis
ENSP00000397566
I
0.893
ENSMPUG00000016153
Mustela putorius furo
ENSMPUG00000016153
I
0.860
ENSAPLG00000006811
Anas platyrhynchos
ENSAPLG00000006811
I
0.795
Aan_R007261
Calypte anna
Aan_R007261
I
0.792
Brh_R010572
Buceros rhinoceros
Brh_R010572
I
0.792
Afo_R005311
Aptenodytes forsteri
Afo_R005311
I
0.789
Gfo_R013537
Geospiza fortis
Gfo_R013537
I
0.784
Alligator_sinensis_CCG003099.1
Alligator sinensis
Alligator_sinensis_CCG003099.1
I
0.781
GTF2IRD1
Taeniopygia guttata
ENSTGUG00000003638
I
0.781
gtf2ird1
Xenopus tropicalis
XB-GENE-5857402
I
0.778
ENSPSIG00000012562
Pelodiscus sinensis
ENSPSIG00000012562
I
0.757
GTF2IRD1
Gallus gallus
ENSGALG00000001263
I
0.741
GTF2IRD1
Bos taurus
ENSBTAG00000006212
I
0.739
ENSOARG00000011517
Ovis aries
ENSOARG00000011517
I
0.739
GTF2IRD1
Sus scrofa
ENSSSCG00000007720
I
0.739
GTF2IRD1
Equus caballus
ENSECAG00000019745
I
0.738
GTF2IRD1
Myotis lucifugus
ENSMLUG00000001668
I
0.736
Myotis_brandtii_GTF2IRD1_10014286
Myotis brandtii
Myotis_brandtii_GTF2IRD1_10014286
I
0.736
Cmyd_10014806
Chelonia mydas
Cmyd_10014806
I
0.733
ENSPPYG00000017485
Pongo abelii
ENSPPYG00000017485
I
0.733
GTF2IRD1
Felis catus
ENSFCAG00000006551
I
0.733
GTF2IRD1
Dasypus novemcinctus
ENSDNOG00000024296
I
0.733
GTF2IRD1
Canis familiaris
ENSCAFG00000011763
I
0.733
GTF2IRD1
Homo sapiens
ENSG00000006704
D
0.733
GTF2IRD1
Macaca mulatta
ENSMMUG00000018842
I
0.733
GTF2IRD1
Pan troglodytes
ENSPTRG00000019292
I
0.733
ENSAMEG00000015311
Ailuropoda melanoleuca
ENSAMEG00000015311
I
0.733
ENSSTOG00000014343
Ictidomys tridecemlineatus
ENSSTOG00000014343
I
0.728
GTF2IRD1
Cavia porcellus
ENSCPOG00000004421
I
0.728
GTF2IRD1
Oryctolagus cuniculus
ENSOCUG00000026916
I
0.728
ENSMEUG00000012139
Macropus eugenii
ENSMEUG00000012139
I
0.725
Gtf2ird1
Rattus norvegicus
ENSRNOG00000001478
I
0.715
Gtf2ird1
Mus musculus
ENSMUSG00000023079
I
0.715
LOC100912262
Rattus norvegicus
ENSRNOG00000050193
I
0.715
Pvit_17519
Pogona vitticeps
Pvit_17519
I
0.714