CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gtf2ird1
(
Oryzias latipes
)
GTF2I-like
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02946 (GTF2I)
IPR004212
ENSORLG00000015316
T203479_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GTF2IRD1
M10618_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BEN_01
0.768
0.768
GTF2IRD1
M10619_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BEN_02
0.768
0.768
GTF2IRD1
M10620_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GTF2IRD1_01
0.768
0.768
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000019183
GTF2I-like
156
230
LRKMVEEVFTVLYSEAVGKSSLVPVPYETIQKDPGCVVAHGLPDGVALKKPSEYDTKTLMKILEQSHRIHFTVQS
ENSORLP00000019183
GTF2I-like
365
439
LRECVQILFNSRYAEALGLDHMVPVPYRKIACDPGAVEIIGIPDQIPFKRPCTYGVPKLKRILDERHSIRFVVKR
ENSORLP00000019183
GTF2I-like
577
651
LRRQVESLFGIKYAEALGLTEVTKVPYSRFQMYPEDLYVTGLPDGISLRRPNCFGAAKLRKILAASGQIQFVIKR
ENSORLP00000019183
GTF2I-like
713
787
LREQVQDLFNRKYGEALGIKYPVQVPYKRIKNNPDSVIIQGLPPGIPFRKPCTFGSQNLERILAVADKISFTITR
ENSORLP00000019183
GTF2I-like
810
884
LREQVKELFNKKYGEALGLDRSVVVPYKLIRGSPESVEVGGLPDDIPFRNPNTYDLLCLEKILQAADKITFNIKS
Links
Other
GTF2I-like
family TFs
Other
Oryzias latipes
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy