CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSPSIG00000012562
(
Pelodiscus sinensis
)
GTF2I-like
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02946 (GTF2I)
IPR004212
ENSPSIG00000012562
T203489_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GTF2IRD1
M10618_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BEN_01
0.928
0.928
GTF2IRD1
M10619_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BEN_02
0.928
0.928
GTF2IRD1
M10620_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GTF2IRD1_01
0.928
0.928
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPSIP00000014337
GTF2I-like
156
230
LRKMVEEVFDVLYSEALGKSSVVPLPYEKLMKEPGLLAVAGLPEGLGFRKPTEYDLKSLMAILEHSHSIRFRLKR
ENSPSIP00000014337
GTF2I-like
379
453
LRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIIGIPDKIPFKRPCTYGVPKLKRILEERHNIHFVIKR
ENSPSIP00000014337
GTF2I-like
595
669
LRKQVETLFNARYAKAMGISEPVKVPYAKFLMYPEDLYVVGLPEGILLRRPNCFGIAKLKKILQASNSIQFVIKR
ENSPSIP00000014337
GTF2I-like
725
799
LREQVQDLFNKKYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIKFTVTR
ENSPSIP00000014337
GTF2I-like
822
896
LREQVKELFNEKYGEALGLNRPVLVPYKLIRDSPDAVEVTGLPDDIPFRNPNTYDIHRLEKILKAREHIRMVIIN
ENSPSIP00000014351
GTF2I-like
125
199
LRKMVEEVFDVLYSEALGKSSVVPLPYEKLMKEPGLLAVAGLPEGLGFRKPTEYDLKSLMAILEHSHSIRFRLKR
ENSPSIP00000014351
GTF2I-like
348
422
LRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIIGIPDKIPFKRPCTYGVPKLKRILEERHNIHFVIKR
ENSPSIP00000014351
GTF2I-like
572
646
LRKQVETLFNARYAKAMGISEPVKVPYAKFLMYPEDLYVVGLPEGILLRRPNCFGIAKLKKILQASNSIQFVIKR
ENSPSIP00000014351
GTF2I-like
702
776
LREQVQDLFNKKYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIKFTVTR
ENSPSIP00000014351
GTF2I-like
799
873
LREQVKELFNEKYGEALGLNRPVLVPYKLIRDSPDAVEVTGLPDDIPFRNPNTYDIHRLEKILKAREHIRMVIIN
Links
Other
GTF2I-like
family TFs
Other
Pelodiscus sinensis
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy