CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gtf2ird1
(
Takifugu rubripes
)
GTF2I-like
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02946 (GTF2I)
IPR004212
ENSTRUG00000010068
T203512_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GTF2IRD1
M10618_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BEN_01
0.743
0.743
GTF2IRD1
M10619_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BEN_02
0.796
0.796
GTF2IRD1
M10620_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GTF2IRD1_01
0.796
0.796
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000025329
GTF2I-like
133
202
LKRLCPCAGEALGKNSLLPVPYDSILKEPGCVVAHGLPDGVGLKKPCEYDTKTLMKILEQSHRIQFSVNR
ENSTRUP00000025329
GTF2I-like
352
426
LRECVQILFNSRYAEALGLDHMVPVPYRKIACDPGAVEIIGIPDQIPFKRPCTYGVPKLKRILDERHGIRFIVKR
ENSTRUP00000025329
GTF2I-like
576
650
LRRQVENLFSIKFAEALGLPEPAKVPYSKFQIYPEDLVVTGLPDGISLRRPNCYGTAKLRKILAASSQIQFVIKR
ENSTRUP00000025329
GTF2I-like
710
784
LREQVQDLFNRKYGEALGIKYPVQVPYKRIKNNPDSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIRFTITR
ENSTRUP00000025329
GTF2I-like
807
881
LREQVKELFNRKYGEALGSDHSVLVPYKLIRGSPESVEVSGLPEDIPFRNPNTYDIVCLEKILQAADKIVISVKN
ENSTRUP00000025330
GTF2I-like
107
176
LKRLCPCAGEALGKNSLLPVPYDSILKEPGCVVAHGLPDGVGLKKPCEYDTKTLMKILEQSHRIQFSVNR
ENSTRUP00000025330
GTF2I-like
326
400
LRECVQILFNSRYAEALGLDHMVPVPYRKIACDPGAVEIIGIPDQIPFKRPCTYGVPKLKRILDERHGIRFIVKR
ENSTRUP00000025330
GTF2I-like
550
624
LRRQVENLFSIKFAEALGLPEPAKVPYSKFQIYPEDLVVTGLPDGISLRRPNCYGTAKLRKILAASSQIQFVIKR
ENSTRUP00000025330
GTF2I-like
684
758
LREQVQDLFNRKYGEALGIKYPVQVPYKRIKNNPDSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIRFTITR
ENSTRUP00000025330
GTF2I-like
781
855
LREQVKELFNRKYGEALGSDHSVLVPYKLIRGSPESVEVSGLPEDIPFRNPNTYDIVCLEKILQAADKIVISVKN
ENSTRUP00000025331
GTF2I-like
103
172
LKRLCPCAGEALGKNSLLPVPYDSILKEPGCVVAHGLPDGVGLKKPCEYDTKTLMKILEQSHRIQFSVNR
ENSTRUP00000025331
GTF2I-like
322
396
LRECVQILFNSRYAEALGLDHMVPVPYRKIACDPGAVEIIGIPDQIPFKRPCTYGVPKLKRILDERHGIRFIVKR
ENSTRUP00000025331
GTF2I-like
541
615
LRRQVENLFSIKFAEALGLPEPAKVPYSKFQIYPEDLVVTGLPDGISLRRPNCYGTAKLRKILAASSQIQFVIKR
ENSTRUP00000025331
GTF2I-like
675
749
LREQVQDLFNRKYGEALGIKYPVQVPYKRIKNNPDSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIRFTITR
ENSTRUP00000025331
GTF2I-like
772
846
LREQVKELFNRKYGEALGSDHSVLVPYKLIRGSPESVEVSGLPEDIPFRNPNTYDIVCLEKILQAADKIVISVKN
ENSTRUP00000025332
GTF2I-like
1
24
CEYDTKTLMKILEQSHRIQFSVNR
ENSTRUP00000025332
GTF2I-like
174
248
LRECVQILFNSRYAEALGLDHMVPVPYRKIACDPGAVEIIGIPDQIPFKRPCTYGVPKLKRILDERHGIRFIVKR
ENSTRUP00000025332
GTF2I-like
393
467
LRRQVENLFSIKFAEALGLPEPAKVPYSKFQIYPEDLVVTGLPDGISLRRPNCYGTAKLRKILAASSQIQFVIKR
ENSTRUP00000025332
GTF2I-like
527
601
LREQVQDLFNRKYGEALGIKYPVQVPYKRIKNNPDSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIRFTITR
ENSTRUP00000025332
GTF2I-like
655
729
LREQVKELFNRKYGEALGSDHSVLVPYKLIRGSPESVEVSGLPEDIPFRNPNTYDIVCLEKILQAADKIVISVKN
ENSTRUP00000025333
GTF2I-like
1
44
CDPGAVEIIGIPDQIPFKRPCTYGVPKLKRILDERHGIRFIVKR
ENSTRUP00000025333
GTF2I-like
90
164
LREQVQDLFNRKYGEALGIKYPVQVPYKRIKNNPDSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIRFTITR
ENSTRUP00000025333
GTF2I-like
194
268
LREQVKELFNRKYGEALGSDHSVLVPYKLIRGSPESVEVSGLPEDIPFRNPNTYDIVCLEKILQAADKIVISVKN
ENSTRUP00000025334
GTF2I-like
1
44
CDPGAVEIIGIPDQIPFKRPCTYGVPKLKRILDERHGIRFIVKR
ENSTRUP00000025334
GTF2I-like
69
143
LREQVQDLFNRKYGEALGIKYPVQVPYKRIKNNPDSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIRFTITR
ENSTRUP00000025334
GTF2I-like
173
247
LREQVKELFNRKYGEALGSDHSVLVPYKLIRGSPESVEVSGLPEDIPFRNPNTYDIVCLEKILQAADKIVISVKN
Links
Other
GTF2I-like
family TFs
Other
Takifugu rubripes
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy