CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Afo_R005311
(
Aptenodytes forsteri
)
GTF2I-like
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02946 (GTF2I)
IPR004212
Afo_R005311
T203549_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GTF2IRD1
M10618_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BEN_01
0.917
0.917
GTF2IRD1
M10619_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BEN_02
0.917
0.917
GTF2IRD1
M10620_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GTF2IRD1_01
0.917
0.917
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Afo_R005311
GTF2I-like
126
200
LRKMVEEVFDVLYSEAMGKSSVVPLPYERFLKGPGWLAVAGLPEGISFKKPMEYDVKSLMAILEHSHSIRFRLKR
Afo_R005311
GTF2I-like
347
421
LRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIIGIPDKIPFKRPCTYGVPKLKRILEERHNIHFVIKR
Afo_R005311
GTF2I-like
569
643
LRKQVEILFNTRYAKAIGISEPVKVPYSKFLMYPEDLFVVGLPEGILLRRPNCFGIAKLKKILQASNNIQFVIKR
Afo_R005311
GTF2I-like
700
774
LREQVQDLFNKKYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIKFTVTR
Afo_R005311
GTF2I-like
797
871
LREQVKELFNEKYGEALGLNRPVMVPYKLIRDSPDAMEVTGLPDDIPFRNPNTYDIHRLEKILKARESIRMVIIN
Links
Other
GTF2I-like
family TFs
Other
Aptenodytes forsteri
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy