CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSP00000397566
(
Macaca fascicularis
)
GTF2I-like
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02946 (GTF2I)
IPR004212
ENSP00000397566
T203567_2.00
GigaDB (2015-Oct-22)
NCBI Gene Info:
The protein encoded by this gene contains five GTF2I-like repeats and each repeat possesses a potential helix-loop-helix (HLH) motif. It may have the ability to interact with other HLH-proteins and function as a transcription factor or as a positive transcriptional regulator under the control of Retinoblastoma protein. This gene plays a role in craniofacial and cognitive development and mutations have been associated with Williams-Beuren syndrome, a multisystem developmental disorder caused by deletion of multiple genes at 7q11.23. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Nov 2010]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GTF2IRD1
M10618_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BEN_01
0.779
0.779
GTF2IRD1
M10619_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BEN_02
0.779
0.779
GTF2IRD1
M10620_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GTF2IRD1_01
0.779
0.779
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000397566
GTF2I-like
160
234
LRKMVEEVFDVLYSEALGRASVVPLPYERLLREPGLLAVQGLPEGLAFRRPAEYDPKALMAILEHSHRIRFKLKR
ENSP00000397566
GTF2I-like
383
457
LRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIVGIPDKIPFKRPCTYGVPKLKRILEERHSIHFIIKR
ENSP00000397566
GTF2I-like
597
671
LRKQVELLFNTRYAKAIGISEPVKVPYSKFLMHPEELFVVGLPEGISLRRPNCFGIAKLRKILEASNSIQFVIKR
ENSP00000397566
GTF2I-like
722
795
LREQVQDLFNKKYGKQRRTPEPVQVPYKRIKSNPSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIKFTVTR
Links
Other
GTF2I-like
family TFs
Other
Macaca fascicularis
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSMPUG00000016153
Mustela putorius furo
ENSMPUG00000016153
I
0.900
GTF2IRD1
Meleagris gallopavo
ENSMGAG00000016801
I
0.893
Tal_R007678
Tyto alba
Tal_R007678
I
0.839
GTF2IRD1
Macaca mulatta
ENSMMUG00000018842
I
0.779
ENSPPYG00000017485
Pongo abelii
ENSPPYG00000017485
I
0.779
GTF2IRD1
Homo sapiens
ENSG00000006704
D
0.779
GTF2IRD1
Pan troglodytes
ENSPTRG00000019292
I
0.779
GTF2IRD1
Myotis lucifugus
ENSMLUG00000001668
I
0.776
Myotis_brandtii_GTF2IRD1_10014286
Myotis brandtii
Myotis_brandtii_GTF2IRD1_10014286
I
0.776
ENSSTOG00000014343
Ictidomys tridecemlineatus
ENSSTOG00000014343
I
0.773
GTF2IRD1
Sus scrofa
ENSSSCG00000007720
I
0.773
ENSAMEG00000015311
Ailuropoda melanoleuca
ENSAMEG00000015311
I
0.773
ENSOARG00000011517
Ovis aries
ENSOARG00000011517
I
0.773
GTF2IRD1
Equus caballus
ENSECAG00000019745
I
0.773
GTF2IRD1
Felis catus
ENSFCAG00000006551
I
0.773
GTF2IRD1
Canis familiaris
ENSCAFG00000011763
I
0.773
GTF2IRD1
Bos taurus
ENSBTAG00000006212
I
0.773
GTF2IRD1
Dasypus novemcinctus
ENSDNOG00000024296
I
0.768
GTF2IRD1
Oryctolagus cuniculus
ENSOCUG00000026916
I
0.768
GTF2IRD1
Cavia porcellus
ENSCPOG00000004421
I
0.763
Gtf2ird1
Rattus norvegicus
ENSRNOG00000001478
I
0.755
LOC100912262
Rattus norvegicus
ENSRNOG00000050193
I
0.755
Gtf2ird1
Mus musculus
ENSMUSG00000023079
I
0.755
ENSCSAG00000018202
Chlorocebus sabaeus
ENSCSAG00000018202
N
0.749
gtf2ird1
Xenopus tropicalis
XB-GENE-5857402
I
0.747
ENSMEUG00000012139
Macropus eugenii
ENSMEUG00000012139
I
0.733
ENSAPLG00000006811
Anas platyrhynchos
ENSAPLG00000006811
I
0.709
GTF2IRD1
Taeniopygia guttata
ENSTGUG00000003638
I
0.709
Aan_R007261
Calypte anna
Aan_R007261
I
0.709
ENSPSIG00000012562
Pelodiscus sinensis
ENSPSIG00000012562
I
0.709
Gfo_R013537
Geospiza fortis
Gfo_R013537
I
0.707
Afo_R005311
Aptenodytes forsteri
Afo_R005311
I
0.707
Alligator_sinensis_CCG003099.1
Alligator sinensis
Alligator_sinensis_CCG003099.1
I
0.707
Brh_R010572
Buceros rhinoceros
Brh_R010572
I
0.707
GTF2IRD1
Loxodonta africana
ENSLAFG00000006505
N
0.703