gtf2ird1 (Xenopus tropicalis)
GTF2I-like

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02946 (GTF2I) IPR004212 XB-GENE-5857402 T203585_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GTF2IRD1
M10618_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BEN_01 		0.812 0.812
GTF2IRD1
M10619_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BEN_02 		0.812 0.812
GTF2IRD1
M10620_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GTF2IRD1_01 		0.812 0.812
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002932338 GTF2I-like 126 200
XP_002932338 GTF2I-like 347 421
XP_002932338 GTF2I-like 530 604
XP_002932338 GTF2I-like 660 734
XP_002932338 GTF2I-like 757 780

Links

Other GTF2I-like family TFs
Other Xenopus tropicalis TFs

Invalid Input OrderBy

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action