gtf2ird1.S (Xenopus laevis)
GTF2I-like

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02946 (GTF2I) IPR004212 XB-GENE-5857419 T203586_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GTF2IRD1
M10618_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BEN_01
0.802 0.802
GTF2IRD1
M10619_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BEN_02
0.802 0.802
GTF2IRD1
M10620_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GTF2IRD1_01
0.802 0.802
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI69835 GTF2I-like 126 199
AAI69835 GTF2I-like 341 415
AAI69835 GTF2I-like 606 680
AAI69835 GTF2I-like 736 810
AAI69835 GTF2I-like 833 907
AAM28813 GTF2I-like 126 199
AAM28813 GTF2I-like 341 415
AAM28813 GTF2I-like 607 681
AAM28813 GTF2I-like 737 811
AAM28813 GTF2I-like 834 908

Links

Other GTF2I-like family TFs
Other Xenopus laevis TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
B7ZQJ9 Xenopus laevis B7ZQJ9 I 1.000
gtf2ird1 Xenopus tropicalis XB-GENE-5857402 I 0.917
Tal_R007678 Tyto alba Tal_R007678 I 0.826
ENSPSIG00000012562 Pelodiscus sinensis ENSPSIG00000012562 I 0.819
ENSAPLG00000006811 Anas platyrhynchos ENSAPLG00000006811 I 0.813
Aan_R007261 Calypte anna Aan_R007261 I 0.813
Brh_R010572 Buceros rhinoceros Brh_R010572 I 0.811
ENSMEUG00000012139 Macropus eugenii ENSMEUG00000012139 I 0.810
Alligator_sinensis_CCG003099.1 Alligator sinensis Alligator_sinensis_CCG003099.1 I 0.808
Gfo_R013537 Geospiza fortis Gfo_R013537 I 0.808
GTF2IRD1 Taeniopygia guttata ENSTGUG00000003638 I 0.807
Afo_R005311 Aptenodytes forsteri Afo_R005311 I 0.805
ENSMPUG00000016153 Mustela putorius furo ENSMPUG00000016153 I 0.804
LOC100912262 Rattus norvegicus ENSRNOG00000050193 I 0.803
Gtf2ird1 Rattus norvegicus ENSRNOG00000001478 I 0.803
Myotis_brandtii_GTF2IRD1_10014286 Myotis brandtii Myotis_brandtii_GTF2IRD1_10014286 I 0.803
ENSOARG00000011517 Ovis aries ENSOARG00000011517 I 0.803
GTF2IRD1 Dasypus novemcinctus ENSDNOG00000024296 I 0.803
GTF2IRD1 Myotis lucifugus ENSMLUG00000001668 I 0.803
GTF2IRD1 Bos taurus ENSBTAG00000006212 I 0.803
GTF2IRD1 Macaca mulatta ENSMMUG00000018842 I 0.802
GTF2IRD1 Felis catus ENSFCAG00000006551 I 0.802
GTF2IRD1 Canis familiaris ENSCAFG00000011763 I 0.802
GTF2IRD1 Homo sapiens ENSG00000006704 D 0.802
GTF2IRD1 Equus caballus ENSECAG00000019745 I 0.802
GTF2IRD1 Sus scrofa ENSSSCG00000007720 I 0.802
ENSAMEG00000015311 Ailuropoda melanoleuca ENSAMEG00000015311 I 0.802
Gtf2ird1 Mus musculus ENSMUSG00000023079 I 0.802
ENSPPYG00000017485 Pongo abelii ENSPPYG00000017485 I 0.802
GTF2IRD1 Pan troglodytes ENSPTRG00000019292 I 0.802
ENSSTOG00000014343 Ictidomys tridecemlineatus ENSSTOG00000014343 I 0.799
GTF2IRD1 Oryctolagus cuniculus ENSOCUG00000026916 I 0.795
GTF2IRD1 Cavia porcellus ENSCPOG00000004421 I 0.794
Cmyd_10014806 Chelonia mydas Cmyd_10014806 I 0.779
ENSLACG00000018407 Latimeria chalumnae ENSLACG00000018407 I 0.752
ENSLOCG00000002184 Lepisosteus oculatus ENSLOCG00000002184 I 0.751
ENSAMXG00000007482 Astyanax mexicanus ENSAMXG00000007482 I 0.743
gtf2ird1 Takifugu rubripes ENSTRUG00000010068 I 0.741
gtf2ird1 Danio rerio ENSDARG00000022203 I 0.736
ENSXMAG00000015294 Xiphophorus maculatus ENSXMAG00000015294 I 0.733
ENSPFOG00000001233 Poecilia formosa ENSPFOG00000001233 I 0.733
gtf2ird1 Oryzias latipes ENSORLG00000015316 I 0.725
ENSGMOG00000013638 Gadus morhua ENSGMOG00000013638 I 0.719
gtf2ird1 Tetraodon nigroviridis ENSTNIG00000004695 I 0.717
gtf2ird1 Gasterosteus aculeatus ENSGACG00000020844 I 0.715