CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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XP_002932326
(
Xenopus tropicalis
)
GTF2I-like
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02946 (GTF2I)
IPR004212
XP_002932326
T203587_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GTF2I
M10621_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TFIII_Q6_01
0.856
0.856
GTF2I
M10622_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TFIII_Q6
0.856
0.856
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002932326
GTF2I-like
107
181
LQKSVEDLFCICYGKALGKSTPVPVPYDKMVRDPTAVSVTGLPKDVFVKDPSNYDLETVTQILHNRSQVSFSIKR
XP_002932326
GTF2I-like
305
379
LRKQVEELFEKKYAQAINVTGPVAIPYHLFQSNTEDLYVEGLPEGIPFRRPSTYGIPRLERILLARERIRFVIKK
XP_002932326
GTF2I-like
409
483
LRKIVDQLFSKKFAEALGKTEAMSVPYQKFEANPAEMYVEGLPDNIPFRSPSWYGIPRLEKIIQVGNRIKFVIKK
XP_002932326
GTF2I-like
514
588
LRKQVEEIFNTKFAQALGLPEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSAKIKFIVKK
XP_002932326
GTF2I-like
669
743
LKQKVEALFDEKCGEALGLNEPYKVPFALFESYPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNRAKIKFVIKK
XP_002932326
GTF2I-like
802
876
LREQVNELFSKKFGEAIGMNFPVKVPYRKITTNPGCVVVDGMPPGVSFKAPSYLEMSSMRRILDSAEFIKFTVIR
Links
Other
GTF2I-like
family TFs
Other
Xenopus tropicalis
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy