CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_1400008
(
Branchiostoma floridae
)
GTF2I-like,Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02946 (GTF2I)
PF05225 (HTH_psq)
IPR004212
IPR007889
estExt_fgenesh2_pg.C_1400008
T203592_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_1400008
GTF2I-like
976
1034
VKVLGKRRRRFPYGLYKEGKIVVEGLPDGVTYQRPSEVGALKLKTFLKHMDNIVIRVID
estExt_fgenesh2_pg.C_1400008
Pipsqueak
1175
1217
DKDIIAKMLQDIIENKLSISAASRKYGVPQSTVSDKIKGKSAM
estExt_fgenesh2_pg.C_1400008
Pipsqueak
1655
1698
DKEKIEEILQDIDENKLSVYAASKKHGVPRATLHRKIKGRTAMD
estExt_fgenesh2_pg.C_1400008
Pipsqueak
2096
2138
DKDKIEEILKDIAENKLTISTASRKYGVPRSTLYDKVQGKSAL
estExt_fgenesh2_pg.C_1400008
Pipsqueak
2568
2605
EEILKDIAENKLSTRAASRKYGVPRSTLQDKVQGKSAL
Links
Other
GTF2I-like,Pipsqueak
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found