CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMAG_05266
(
Allomyces macrogynus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
AMAG_05266
T203600_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
si:dkey-43p13.5
M02082_2.00
Danio rerio
DNWNWWNWNH
DNWNWWNWNH
PBM
Weirauch et al.(2014)
pTH6636
0.650
0.404
hbx10
M02074_2.00
Dictyostelium discoideum
NYAATWWN
NWWATTRN
PBM
Weirauch et al.(2014)
pTH5547
0.622
0.632
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AMAG_05266T0
Homeodomain
81
137
GKRRARATPDQLAILEETFLTHTSPNQQLRQELAQKLGMSERSVQIWFQNKRAKVKL
Links
Other
Homeodomain
family TFs
Other
Allomyces macrogynus
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy