AMSG_02417 (Thecamonas trahens)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 AMSG_02417 T203625_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MEIS3
M03093_2.00
Homo sapiens
DTGACANN

NNTGTCAH
SELEX
Jolma et al.(2013)
MEIS3_1
0.725 0.436
MEIS3
M03094_2.00
Homo sapiens
TGACAGSTGTCA

TGACASCTGTCA
SELEX
Jolma et al.(2013)
MEIS3_2
0.725 0.436
MEIS3
M04951_2.00
Homo sapiens
TGWCABVTGWCA

TGWCABVTGWCA
SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX
0.725 0.436
MEIS3
M04952_2.00
Homo sapiens
YGWCABVTGWCR

YGWCABVTGWCR
SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX
0.725 0.436
Q5EVH4_OIKDI
M02227_2.00
Oikopleura dioica
NTGACAKN

NMTGTCAN
PBM
Weirauch et al.(2014)
pTH6041
0.659 0.410
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AMSG_02417T0 Homeodomain 211 256

Links

Other Homeodomain family TFs
Other Thecamonas trahens TFs

Invalid Input OrderBy

264 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action