CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CIMG_08965
(
Coccidioides immitis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
CIMG_08965
T203642_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_01217
M02056_2.00
Aspergillus nidulans
NWTATHDNNN
NNNHDATAWN
PBM
Weirauch et al.(2014)
pTH5818
0.816
0.875
NCU03070
M02222_2.00
Neurospora crassa
NNYCAATAWW
WWTATTGRNN
PBM
Weirauch et al.(2014)
pTH5859
0.632
0.554
NCU03070
M02223_2.00
Neurospora crassa
NNHAYNDNN
NNHNRTDNN
PBM
Weirauch et al.(2014)
pTH9699
0.632
0.554
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CIMG_08965T0
Homeodomain
73
128
LSRPRLTKEQVETLEAQFQAQPKPTSNVKRQLAMQTNLTLPRVANWFQNRRAKEKQ
Links
Other
Homeodomain
family TFs
Other
Coccidioides immitis
TFs
85 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy