CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CpipJ_CPIJ003111
(
Culex pipiens
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
CpipJ_CPIJ003111
T203675_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AGAP009986
M02036_2.00
Anopheles gambiae
NNDACANNNN
NNNNTGTHNN
PBM
Weirauch et al.(2014)
pTH5919
0.826
0.945
CG11617
M06533_2.00
Drosophila melanogaster
ATGTHAA
TTDACAT
B1H
Mathelier et al.(2014)
MA0173.1
0.793
0.909
CG11617
M06341_2.00
Drosophila melanogaster
TGTHAAAH
DTTTDACA
B1H
Zhu et al.(2011)
CG11617_Cell_FBgn0031232
0.793
0.909
CG11617
M06342_2.00
Drosophila melanogaster
NNNTDACA
TGTHANNN
B1H
Zhu et al.(2011)
CG11617_SOLEXA_FBgn0031232
0.793
0.909
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CpipJ_CPIJ003111-RA
Homeodomain
27
84
IKRLFTPEIKRMLKDWLVRRRENPYPNREEKKQLACETGLTYTQICNWFANWRRKLKN
Links
Other
Homeodomain
family TFs
Other
Culex pipiens
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy