CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
RO3G_02291
(
Rhizopus oryzae
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
RO3G_02291
T203758_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CAD26261
M02055_2.00
Encephalitozoon cuniculi
NNYAATWWA
TWWATTRNN
PBM
Weirauch et al.(2014)
pTH6363
0.685
0.474
NEMVEDRAFT_v1g105595
M02143_2.00
Nematostella vectensis
NTWATWRN
NYWATWAN
PBM
Weirauch et al.(2014)
pTH5503
0.658
0.456
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RO3T_02290
Homeodomain
19
76
RPKRKRITPNQLEVLTSIFERTKTPNYQLREHTAKELNMTNREVQVWFQNRRAKLNRK
Links
Other
Homeodomain
family TFs
Other
Rhizopus oryzae
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy