VDBG_00856 (Verticillium albo atrum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 VDBG_00856 T203829_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FGRRES_17238
M02136_2.00 		Fusarium graminearum
NNNDRCDNNN
NNNHGYHNNN		 PBM
Weirauch et al.(2014)
pTH5505 		0.843 0.925
FGRRES_17152
M02135_2.00 		Fusarium graminearum
CATGTCAW
WTGACATG		 PBM
Weirauch et al.(2014)
pTH6014 		0.637 0.679
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VDBG_00856T0 Homeodomain 224 279

Links

Other Homeodomain family TFs
Other Verticillium albo atrum TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VDAG_00465 Verticillium dahliae VDAG_00465 I 0.867
VDBG_00856 Verticillium alfalfae VDBG_00856 I 0.867
FFUJ_04435 Fusarium fujikuroi FFUJ_04435 I 0.843
FVEG_04119 Fusarium verticillioides FVEG_04119 I 0.843
GLRG_08361 Colletotrichum graminicola GLRG_08361 I 0.843
FGRRES_17238 Fusarium graminearum FGRRES_17238 D 0.843
UV8b_5932 Ustilaginoidea virens UV8b_5932 I 0.843
CH063_05452 Colletotrichum higginsianum CH063_05452 I 0.843
CSUB01_02000 Colletotrichum sublineola CSUB01_02000 I 0.843
CGGC5_14308 Colletotrichum gloeosporioides CGGC5_14308 I 0.843
ACRE_004430 Acremonium chrysogenum ACRE_004430 I 0.830
Bcin06g06480 Botrytis cinerea Bcin06g06480 I 0.813
SS1G_03098 Sclerotinia sclerotiorum SS1G_03098 I 0.809
VHEMI03354 Torrubiella hemipterigena VHEMI03354 I 0.803
OIDMADRAFT_141009 Oidiodendron maius OIDMADRAFT_141009 I 0.784
CMQ_3175 Grosmannia clavigera CMQ_3175 I 0.782
HMPREF1624_05953 Sporothrix schenckii HMPREF1624_05953 I 0.780
F503_02949 Ophiostoma piceae uamh F503_02949 I 0.780
SPBR_00057 Sporothrix brasiliensis SPBR_00057 I 0.780
MAPG_01731 Magnaporthe poae MAPG_01731 I 0.748
GGTG_02769 Gaeumannomyces graminis GGTG_02769 I 0.748
MYCTH_122893 Myceliophthora thermophila MYCTH_122893 I 0.688
PDIP_88440 Penicillium digitatum PDIP_88440 I 0.682
FOXG_05651 Fusarium oxysporum FOXG_05651 I 0.671
FVEG_06579 Fusarium verticillioides FVEG_06579 I 0.637
FFUJ_09085 Fusarium fujikuroi FFUJ_09085 I 0.637
FGRRES_17152 Fusarium graminearum FGRRES_17152 D 0.637
FOXG_08967 Fusarium oxysporum FOXG_08967 I 0.637
TRIREDRAFT_119826 Trichoderma reesei TRIREDRAFT_119826 I 0.633
VDAG_07897 Verticillium dahliae VDAG_07897 I 0.631
SAPIO_CDS1962 Scedosporium apiospermum SAPIO_CDS1962 I 0.608
DOTSEDRAFT_78718 Dothistroma septosporum DOTSEDRAFT_78718 I 0.606
EPUS_00089 Endocarpon pusillum EPUS_00089 I 0.603