ACEP19966 (Atta cephalotes)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ACEP19966 T204065_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Six3
M00483_2.00
Mus musculus
NNNAYMN

NKRTNNN
PBM
Berger et al.(2008)
Six3_1732
0.867 0.965
SIX3
M05159_2.00
Homo sapiens
NNYGATABBN

NVVTATCRNN
SELEX
Yin et al.(2017)
SIX3_eDBD_HT-SELEX
0.867 0.965
SIX3
M10698_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SIX3_Q6
0.867 0.965
SIX3
M05160_2.00
Homo sapiens
NNYGATABVB

VBVTATCRNN
SELEX
Yin et al.(2017)
SIX3_eDBD_Methyl-HT-SELEX
0.867 0.965
Optix
M02124_2.00
Drosophila melanogaster
NNNNNDATMN

NKATHNNNNN
PBM
Weirauch et al.(2014)
pTH5437
0.867 0.947
Optix
M03850_2.00
Drosophila melanogaster
TAATYTAATTA

TAATTARATTA
SELEX
Nitta et al.(2015)
Optix_1
0.867 0.947
Optix
M06526_2.00
Drosophila melanogaster
TGATA

TATCA
B1H
Mathelier et al.(2014)
MA0199.1
0.867 0.947
Optix
M06327_2.00
Drosophila melanogaster
HHVTGATA

TATCABDD
B1H
Zhu et al.(2011)
Optix_Cell_FBgn0025360
0.867 0.947
Optix
M06328_2.00
Drosophila melanogaster
NNNTGATA

TATCANNN
B1H
Zhu et al.(2011)
Optix_SOLEXA_FBgn0025360
0.867 0.947
six3
M02102_2.00
Oryzias latipes
NNDAYMBNNN

NNNVKRTHNN
PBM
Weirauch et al.(2014)
pTH5928
0.865 0.965
SIX6
M00326_2.00
Homo sapiens
NNDATMB

VKATHNN
PBM
Barrera et al.(2016)
SIX6_REF
0.865 0.947
Six6
M00169_2.00
Mus musculus
NNAYMNN

NNKRTNN
PBM
Badis et al.(2009)
Six6_2267
0.865 0.947
Six6
M00412_2.00
Mus musculus
NNNTGATAYCN

NGRTATCANNN
PBM
Berger et al.(2008)
Six6_2267
0.865 0.947
SIX6
M05357_2.00
Homo sapiens
NNYGATASVB

VBSTATCRNN
SELEX
Yin et al.(2017)
SIX6_eDBD_HT-SELEX
0.865 0.947
SIX6
M00325_2.00
Homo sapiens
NNNDATMB

VKATHNNN
PBM
Barrera et al.(2016)
SIX6_H141N
0.865 0.947
SIX6
M05358_2.00
Homo sapiens
VBVYAYCRNN

NNYGRTRBVB
SELEX
Yin et al.(2017)
SIX6_eDBD_Methyl-HT-SELEX
0.865 0.947
SIX6
M00327_2.00
Homo sapiens
NHDAYMBNN

NNVKRTHDN
PBM
Barrera et al.(2016)
SIX6_T165A
0.859 0.930
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACEP19966-PA Homeodomain 148 204

Links

Other Homeodomain family TFs
Other Atta cephalotes TFs

296 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29646.m001068 Ricinus communis 29646.m001068 I 0.000
30068.m002661 Ricinus communis 30068.m002661 I 0.000
AMTR_s00048p00108400 Amborella trichopoda AMTR_s00048p00108400 I 0.000
AMTR_s00059p00094730 Amborella trichopoda AMTR_s00059p00094730 I 0.000
BZIP68 Arabidopsis thaliana AT1G32150 D 0.000
BZIP16 Arabidopsis thaliana AT2G35530 D 0.000
GBF1 Arabidopsis thaliana AT4G36730 D 0.000
BGIOSGA007448 Oryza indica BGIOSGA007448 I 0.000
BGIOSGA036419 Oryza indica BGIOSGA036419 I 0.000
Bo1g005460 Brassica oleracea Bo1g005460 I 0.000
Bo4g038560 Brassica oleracea Bo4g038560 I 0.000
Bo4g183320 Brassica oleracea Bo4g183320 I 0.000
Bostr.23794s0549 Boechera stricta Bostr.23794s0549 I 0.000
Bostr.3359s0141 Boechera stricta Bostr.3359s0141 I 0.000
Bostr.7867s1529 Boechera stricta Bostr.7867s1529 I 0.000
Bra005335 Brassica rapa Bra005335 I 0.000
Bra010572 Brassica rapa Bra010572 I 0.000
Bra011701 Brassica rapa Bra011701 I 0.000
BRADI3G02730 Brachypodium distachyon BRADI3G02730 I 0.000
BRADI4G39630 Brachypodium distachyon BRADI4G39630 I 0.000
Cagra.0993s0063 Capsella grandiflora Cagra.0993s0063 I 0.000
Cagra.3359s0011 Capsella grandiflora Cagra.3359s0011 I 0.000
Cagra.5996s0003 Capsella grandiflora Cagra.5996s0003 I 0.000
Carubv10005287m.g Capsella rubella Carubv10005287m.g I 0.000
cassava11837.valid.m1 Manihot esculenta cassava11837.valid.m1 I 0.000
cassava37043.valid.m1 Manihot esculenta cassava37043.valid.m1 I 0.000
cassava45491.m1 Manihot esculenta cassava45491.m1 I 0.000
Ca_01293 Cicer arietinum Ca_01293 I 0.000
Ca_11455 Cicer arietinum Ca_11455 I 0.000
Ca_15839 Cicer arietinum Ca_15839 I 0.000
chr2.LjT41P23.50.nc Lotus japonicus chr2.LjT41P23.50.nc I 0.000
Ciclev10001333m.g Citrus clementina Ciclev10001333m.g I 0.000
Ciclev10025963m.g Citrus clementina Ciclev10025963m.g I 0.000
Cla008988 Citrullus lanatus Cla008988 I 0.000
Cla014415 Citrullus lanatus Cla014415 I 0.000
Cla016502 Citrullus lanatus Cla016502 I 0.000
Cucsa.104970 Cucumis sativus Cucsa.104970 I 0.000
Cucsa.312800 Cucumis sativus Cucsa.312800 I 0.000
Cucsa.322110 Cucumis sativus Cucsa.322110 I 0.000
estExt_fgenesh1_pg.C_10522 Micromonas pusilla estExt_fgenesh1_pg.C_10522 I 0.000
estExt_fgenesh2_pg.C_Chr_020452 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_020452 I 0.000
Eucgr.E00223 Eucalyptus grandis Eucgr.E00223 I 0.000
Eucgr.H01256 Eucalyptus grandis Eucgr.H01256 I 0.000
evm.TU.supercontig_158.7 Carica papaya evm.TU.supercontig_158.7 I 0.000
evm.TU.supercontig_2741.1 Carica papaya evm.TU.supercontig_2741.1 I 0.000
F775_32205 Aegilops tauschii F775_32205 I 0.000
bZIP68 Arabidopsis lyrata fgenesh2_kg.1__3350__AT1G32150.1 I 0.000
fgeneshCV_pg.C_scaffold_12000127 Chlorella vulgaris fgeneshCV_pg.C_scaffold_12000127 I 0.000
gene13716-v1.0-hybrid Fragaria vesca gene13716-v1.0-hybrid I 0.000
gene29546-v1.0-hybrid Fragaria vesca gene29546-v1.0-hybrid I 0.000
Genemark1.5055_g Coccomyxa subellipsoidea C169 Genemark1.5055_g I 0.000
GLYMA01G01740 Glycine max GLYMA01G01740 I 0.000
GLYMA01G38381 Glycine max GLYMA01G38381 I 0.000
GLYMA02G06550 Glycine max GLYMA02G06550 I 0.000
GLYMA08G34280 Glycine max GLYMA08G34280 I 0.000
GLYMA09G34170 Glycine max GLYMA09G34170 I 0.000
GLYMA16G15810 Glycine max GLYMA16G15810 I 0.000
GLYMA16G25600 Glycine max GLYMA16G25600 I 0.000
Gorai.003G185700 Gossypium raimondii Gorai.003G185700 I 0.000
Gorai.004G181900 Gossypium raimondii Gorai.004G181900 I 0.000
Gorai.007G205700 Gossypium raimondii Gorai.007G205700 I 0.000
Gorai.008G068900 Gossypium raimondii Gorai.008G068900 I 0.000
GRMZM2G019106 Zea mays GRMZM2G019106 I 0.000
GRMZM2G074373 Zea mays GRMZM2G074373 I 0.000
GRMZM2G088140 Zea mays GRMZM2G088140 I 0.000
GRMZM2G153144 Zea mays GRMZM2G153144 I 0.000
GSMUA_Achr4G04530_001 Musa acuminata GSMUA_Achr4G04530_001 I 0.000
GSMUA_Achr4G11610_001 Musa acuminata GSMUA_Achr4G11610_001 I 0.000
GSMUA_Achr4G18980_001 Musa acuminata GSMUA_Achr4G18980_001 I 0.000
GSMUA_Achr5G14150_001 Musa acuminata GSMUA_Achr5G14150_001 I 0.000
GSMUA_Achr9G05310_001 Musa acuminata GSMUA_Achr9G05310_001 I 0.000
gw1.27.125.1 Physcomitrella patens gw1.27.125.1 I 0.000
gw2.11.550.1 Micromonas sp RCC299 gw2.11.550.1 I 0.000
HBP1A_WHEAT Triticum aestivum HBP1A_WHEAT D 0.000
LjSGA_036158.1 Lotus japonicus LjSGA_036158.1 I 0.000
LPERR12G05920 Leersia perrieri LPERR12G05920 I 0.000
Lus10014324.g Linum usitatissimum Lus10014324.g I 0.000
Lus10026033.g Linum usitatissimum Lus10026033.g I 0.000
MDP0000185553 Malus domestica MDP0000185553 I 0.000
MDP0000231274 Malus domestica MDP0000231274 I 0.000
MDP0000286846 Malus domestica MDP0000286846 I 0.000
mgf000639m Mimulus guttatus mgf000639m I 0.000
mgf005151m Mimulus guttatus mgf005151m I 0.000
mgf008195m Mimulus guttatus mgf008195m I 0.000
mgf008605m Mimulus guttatus mgf008605m I 0.000
mgf013375m Mimulus guttatus mgf013375m I 0.000
mgf014804m Mimulus guttatus mgf014804m I 0.000
MLOC_63066 Hordeum vulgare MLOC_63066 I 0.000
MLOC_81641 Hordeum vulgare MLOC_81641 I 0.000
MTR_5g028850 Medicago truncatula MTR_5g028850 I 0.000
MTR_7g116890 Medicago truncatula MTR_7g116890 I 0.000
MTR_8g070820 Medicago truncatula MTR_8g070820 I 0.000
MTR_8g077950 Medicago truncatula MTR_8g077950 I 0.000
OB12G16310 Oryza brachyantha OB12G16310 I 0.000
OBART12G06770 Oryza barthii OBART12G06770 I 0.000
OGLUM12G08090 Oryza glumaepatula OGLUM12G08090 I 0.000
OLONG_021967 Oryza longistaminata OLONG_021967 I 0.000
OMERI12G04560 Oryza meridionalis OMERI12G04560 I 0.000
ONIVA02G02170 Oryza nivara ONIVA02G02170 I 0.000
ONIVA12G06500 Oryza nivara ONIVA12G06500 I 0.000
OPUNC02G01690 Oryza punctata OPUNC02G01690 I 0.000
OPUNC12G06450 Oryza punctata OPUNC12G06450 I 0.000
orange1.1g018605m.g Citrus sinensis orange1.1g018605m.g I 0.000
orange1.1g036551m.g Citrus sinensis orange1.1g036551m.g I 0.000
ORGLA02G0021500 Oryza glaberrima ORGLA02G0021500 I 0.000
ORGLA12G0063500 Oryza glaberrima ORGLA12G0063500 I 0.000
ORUFI12G07600 Oryza rufipogon ORUFI12G07600 I 0.000
OS02G0128200 Oryza sativa OS02G0128200 I 0.000
Pavir.Aa03436 Panicum virgatum Pavir.Aa03436 I 0.000
Pavir.Ab00132 Panicum virgatum Pavir.Ab00132 I 0.000
Pavir.Ca00403 Panicum virgatum Pavir.Ca00403 I 0.000
Pavir.Cb01814 Panicum virgatum Pavir.Cb01814 I 0.000
PDK_20s1310372g001 Phoenix dactylifera PDK_20s1310372g001 I 0.000
PDK_20s1348391g002 Phoenix dactylifera PDK_20s1348391g002 I 0.000
PDK_20s1368181g001 Phoenix dactylifera PDK_20s1368181g001 I 0.000
PDK_20s1372692g002 Phoenix dactylifera PDK_20s1372692g002 I 0.000
PDK_20s1568831g001 Phoenix dactylifera PDK_20s1568831g001 I 0.000
PGSC0003DMG400012660 Solanum tuberosum PGSC0003DMG400012660 I 0.000
PGSC0003DMG400018469 Solanum tuberosum PGSC0003DMG400018469 I 0.000
PK23964.1 Cannabis sativa PK23964.1 D 0.000
Pm023132 Prunus mume Pm023132 I 0.000
Pm026586 Prunus mume Pm026586 I 0.000
POPTR_0001s01840 Populus trichocarpa POPTR_0001s01840 I 0.000
POPTR_0003s09630 Populus trichocarpa POPTR_0003s09630 I 0.000
POPTR_0005s12750 Populus trichocarpa POPTR_0005s12750 I 0.000
POPTR_0007s12460 Populus trichocarpa POPTR_0007s12460 I 0.000
PRUPE_ppa006484mg Prunus persica PRUPE_ppa006484mg I 0.000
PRUPE_ppa008024mg Prunus persica PRUPE_ppa008024mg I 0.000
SapurV1A.0051s0250 Salix purpurea SapurV1A.0051s0250 I 0.000
SapurV1A.0063s0130 Salix purpurea SapurV1A.0063s0130 I 0.000
SapurV1A.0255s0070 Salix purpurea SapurV1A.0255s0070 I 0.000
SapurV1A.0817s0110 Salix purpurea SapurV1A.0817s0110 I 0.000
Sb04g002360 Sorghum bicolor Sb04g002360 I 0.000
Sb08g008300 Sorghum bicolor Sb08g008300 I 0.000
GBF1 Arabidopsis lyrata scaffold_700433.1 I 0.000
SELMODRAFT_125734 Selaginella moellendorffii SELMODRAFT_125734 I 0.000
SELMODRAFT_129391 Selaginella moellendorffii SELMODRAFT_129391 I 0.000
SELMODRAFT_135978 Selaginella moellendorffii SELMODRAFT_135978 I 0.000
Si017637m.g Setaria italica Si017637m.g I 0.000
Si022325m.g Setaria italica Si022325m.g I 0.000
Solyc02g062950.2 Solanum lycopersicum Solyc02g062950.2 I 0.000
Solyc02g085610.2 Solanum lycopersicum Solyc02g085610.2 I 0.000
Solyc08g005290.2 Solanum lycopersicum Solyc08g005290.2 I 0.000
Solyc08g076100.2 Solanum lycopersicum Solyc08g076100.2 I 0.000
TCM_000436 Theobroma cacao TCM_000436 I 0.000
TCM_016606 Theobroma cacao TCM_016606 I 0.000
Thhalv10007879m.g Eutrema salsugineum Thhalv10007879m.g I 0.000
Thhalv10016740m.g Eutrema salsugineum Thhalv10016740m.g I 0.000
Thhalv10025733m.g Eutrema salsugineum Thhalv10025733m.g I 0.000
Traes_5AS_3A85F1C2C Triticum aestivum Traes_5AS_3A85F1C2C I 0.000
Traes_5BL_A5532B750 Triticum aestivum Traes_5BL_A5532B750 I 0.000
Traes_5BS_A5532B750 Triticum aestivum Traes_5BS_A5532B750 I 0.000
Traes_5DL_C794C1EEA Triticum aestivum Traes_5DL_C794C1EEA I 0.000
Traes_6BS_05264DAEA Triticum aestivum Traes_6BS_05264DAEA I 0.000
TRIUR3_18117 Triticum urartu TRIUR3_18117 I 0.000
TRIUR3_34165 Triticum urartu TRIUR3_34165 I 0.000
VIT_02s0012g02250 Vitis vinifera VIT_02s0012g02250 I 0.000
GBF1 Vitis vinifera VIT_04s0023g01360 I 0.000
VIT_18s0001g12120 Vitis vinifera VIT_18s0001g12120 I 0.000