RLT1 (Arabidopsis thaliana)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 AT1G28420 T204455_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RLT1
M02038_2.00		 Arabidopsis thaliana
NDHTCWWN
NWWGADHN		 PBM
Weirauch et al.(2014)
pTH5432		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02038_2.00 Homeodomain 1 57

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G28420.1 Homeodomain 40 96

Links

Other Homeodomain family TFs
Other Arabidopsis thaliana TFs

Invalid Input OrderBy

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action