ATHB-7 (Arabidopsis thaliana)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 AT2G46680 T204486_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATHB-7
M02043_2.00
Arabidopsis thaliana
NHWTGATTGN

NCAATCAWDN
PBM
Weirauch et al.(2014)
pTH8090
(Direct) (Direct)
ATHB-7
M06911_2.00
Arabidopsis thaliana
NHYCAATCATTSW

WSAATGATTGRDN
Dap-seq
OMalley et al.(2016)
ATHB7_col_a
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATHB-12
M00865_2.00
Arabidopsis thaliana
NNNNNNNN

NNNNNNNN
PBM
Franco-Zorrilla et al.(2014)
ATHB12
0.666 0.877
ATHB-12
M02045_2.00
Arabidopsis thaliana
BHWWWWWWDV

BHWWWWWWDV
PBM
Weirauch et al.(2014)
pTH7207
0.666 0.877
ATHB-5
M06932_2.00
Arabidopsis thaliana
NYAATMATTND

HNAATKATTRN
Dap-seq
OMalley et al.(2016)
ATHB5_col_a
0.613 0.632
ATHB-5
M06933_2.00
Arabidopsis thaliana
NYAATMATTN

NAATKATTRN
Dap-seq
OMalley et al.(2016)
ATHB5_colamp_a
0.613 0.632
ATHB-5
M02684_2.00
Arabidopsis thaliana
CAATVATTGVVSV

BSBBCAATBATTG
SELEX
Mathelier et al.(2014)
MA0110.2
0.613 0.632
ATHB-5
M10630_2.00
Arabidopsis thaliana
CAATVATTG

CAATBATTG
Transfac
Matys et al.(2006)
P$ATHB5_01
0.613 0.632
ATHB-13
M06900_2.00
Arabidopsis thaliana
HYAATAATTDD

HHAATTATTRD
Dap-seq
OMalley et al.(2016)
ATHB13_col_a
0.601 0.614
ATHB-13
M06901_2.00
Arabidopsis thaliana
NYAATAATTRW

WYAATTATTRN
Dap-seq
OMalley et al.(2016)
ATHB13_colamp_a
0.601 0.614
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02043_2.00 Homeodomain 30 86

DNA Binding Domains

Protein ID Domain From To Sequence
AT2G46680.1 Homeodomain 30 86
AT2G46680.2 Homeodomain 30 86

Links

Other Homeodomain family TFs
Other Arabidopsis thaliana TFs

309 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1O3_00136 Capronia epimyces A1O3_00136 N 0.000
A1O7_05077 Cladophialophora yegresii A1O7_05077 N 0.000
A1O9_09096 Exophiala aquamarina A1O9_09096 N 0.000
HMPREF1120_03446 Exophiala dermatitidis HMPREF1120_03446 N 0.000
PV06_01690 Exophiala oligosperma PV06_01690 N 0.000
PV07_04915 Cladophialophora immunda PV07_04915 N 0.000
PV08_02436 Exophiala spinifera PV08_02436 N 0.000
Z517_06023 Fonsecaea pedrosoi Z517_06023 N 0.000
Z519_06633 Cladophialophora bantiana Z519_06633 N 0.000