ATHB-7 (Arabidopsis thaliana)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 AT2G46680 T204486_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. Loss of function mutant has abnormally shaped leaves and stems.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATHB-7
M02043_2.00
Arabidopsis thaliana
NHWTGATTGN

NCAATCAWDN
PBM
Weirauch et al.(2014)
pTH8090
(Direct) (Direct)
ATHB-7
M06911_2.00
Arabidopsis thaliana
NHYCAATCATTSW

WSAATGATTGRDN
Dap-seq
OMalley et al.(2016)
ATHB7_col_a
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATHB-12
M00865_2.00
Arabidopsis thaliana
NNNNNNNN

NNNNNNNN
PBM
Franco-Zorrilla et al.(2014)
ATHB12
0.666 0.877
ATHB-12
M02045_2.00
Arabidopsis thaliana
BHWWWWWWDV

BHWWWWWWDV
PBM
Weirauch et al.(2014)
pTH7207
0.666 0.877
ATHB-5
M06932_2.00
Arabidopsis thaliana
NYAATMATTND

HNAATKATTRN
Dap-seq
OMalley et al.(2016)
ATHB5_col_a
0.613 0.632
ATHB-5
M06933_2.00
Arabidopsis thaliana
NYAATMATTN

NAATKATTRN
Dap-seq
OMalley et al.(2016)
ATHB5_colamp_a
0.613 0.632
ATHB-5
M02684_2.00
Arabidopsis thaliana
CAATVATTGVVSV

BSBBCAATBATTG
SELEX
Mathelier et al.(2014)
MA0110.2
0.613 0.632
ATHB-5
M10630_2.00
Arabidopsis thaliana
CAATVATTG

CAATBATTG
Transfac
Matys et al.(2006)
P$ATHB5_01
0.613 0.632
ATHB-13
M06900_2.00
Arabidopsis thaliana
HYAATAATTDD

HHAATTATTRD
Dap-seq
OMalley et al.(2016)
ATHB13_col_a
0.601 0.614
ATHB-13
M06901_2.00
Arabidopsis thaliana
NYAATAATTRW

WYAATTATTRN
Dap-seq
OMalley et al.(2016)
ATHB13_colamp_a
0.601 0.614
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02043_2.00 Homeodomain 30 86

DNA Binding Domains

Protein ID Domain From To Sequence
AT2G46680.1 Homeodomain 30 86
AT2G46680.2 Homeodomain 30 86

Links

Other Homeodomain family TFs
Other Arabidopsis thaliana TFs

309 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R015482 Calypte anna Aan_R015482 N 0.000
Afo_R013969 Aptenodytes forsteri Afo_R013969 N 0.000
Alligator_sinensis_CCG011037.1 Alligator sinensis Alligator_sinensis_CCG011037.1 N 0.000
Brh_R002265 Buceros rhinoceros Brh_R002265 N 0.000
ENSAMEG00000007556 Ailuropoda melanoleuca ENSAMEG00000007556 N 0.000
ENSBTAP00000024222-D1 Bos grunniens ENSBTAP00000024222-D1 N 0.000
ENSCPOG00000020832 Cavia porcellus ENSCPOG00000020832 N 0.000
ENSCSAG00000001058 Chlorocebus sabaeus ENSCSAG00000001058 N 0.000
ENSFALG00000000603 Ficedula albicollis ENSFALG00000000603 N 0.000
ENSGALG00000003420 Gallus gallus ENSGALG00000003420 N 0.000
ENSMEUG00000013710 Macropus eugenii ENSMEUG00000013710 N 0.000
ENSMPUG00000015223 Mustela putorius furo ENSMPUG00000015223 N 0.000
ENSNLEG00000002769 Nomascus leucogenys ENSNLEG00000002769 N 0.000
ENSOARG00000020930 Ovis aries ENSOARG00000020930 N 0.000
ENSP00000362609 Macaca fascicularis ENSP00000362609 N 0.000
ENSPANG00000019096 Papio anubis ENSPANG00000019096 N 0.000
ENSPPYG00000001590 Pongo abelii ENSPPYG00000001590 N 0.000
ENSPSIG00000008472 Pelodiscus sinensis ENSPSIG00000008472 N 0.000
ENSSHAG00000010423 Sarcophilus harrisii ENSSHAG00000010423 N 0.000
ENSTSYG00000009437 Tarsius syrichta ENSTSYG00000009437 N 0.000
Gfo_R011646 Geospiza fortis Gfo_R011646 N 0.000
Myotis_brandtii_ZBTB8A_10012393 Myotis brandtii Myotis_brandtii_ZBTB8A_10012393 N 0.000
Ogr05994 Ophisaurus gracilis Ogr05994 N 0.000
Pvit_17720 Pogona vitticeps Pvit_17720 N 0.000
Tal_R009236 Tyto alba Tal_R009236 N 0.000
ZBTB8A Pteropus vampyrus ENSPVAG00000010978 N 0.000
Zbtb8a Rattus norvegicus ENSRNOG00000008300 N 0.000
ZBTB8A Tursiops truncatus ENSTTRG00000014967 N 0.000
ZBTB8A Sus scrofa ENSSSCG00000021457 N 0.000
ZBTB8A Taeniopygia guttata ENSTGUG00000001373 N 0.000
ZBTB8A Vicugna pacos ENSVPAG00000011873 N 0.000
ZBTB8A Anolis carolinensis ENSACAG00000004819 N 0.000
ZBTB8A Pan troglodytes ENSPTRG00000034505 N 0.000
ZBTB8A Procavia capensis ENSPCAG00000013857 N 0.000
ZBTB8A Canis familiaris ENSCAFG00000023779 N 0.000
ZBTB8A Choloepus hoffmanni ENSCHOG00000004051 N 0.000
ZBTB8A Callithrix jacchus ENSCJAG00000001003 N 0.000
ZBTB8A Dasypus novemcinctus ENSDNOG00000032935 N 0.000
Zbtb8a Dipodomys ordii ENSDORG00000007027 N 0.000
ZBTB8A Equus caballus ENSECAG00000023392 N 0.000
ZBTB8A Felis catus ENSFCAG00000027580 N 0.000
ZBTB8A Homo sapiens ENSG00000160062 N 0.000
ZBTB8A Loxodonta africana ENSLAFG00000031979 N 0.000
ZBTB8A Meleagris gallopavo ENSMGAG00000004949 N 0.000
ZBTB8A Myotis lucifugus ENSMLUG00000023002 N 0.000
ZBTB8A Monodelphis domestica ENSMODG00000017424 N 0.000
Zbtb8a Mus musculus ENSMUSG00000028807 N 0.000
ZBTB8A Ornithorhynchus anatinus ENSOANG00000001191 N 0.000
ZBTB8A Oryctolagus cuniculus ENSOCUG00000021621 N 0.000
ZBTB8A Otolemur garnettii ENSOGAG00000028328 N 0.000
ZBTB8A Ochotona princeps ENSOPRG00000018275 N 0.000
ZBTB8A Bos taurus ENSBTAG00000018199 N 0.000