CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
HAT3.1
(
Arabidopsis thaliana
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
AT3G19510
T204494_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HAT3.1
M02044_2.00
Arabidopsis thaliana
NTRHACYNNN
NNNRGTDYAN
PBM
Weirauch et al.(2014)
pTH7371
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.599
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02044_2.00
Homeodomain
51
101
CKQTDPKTQRLYISFQENQYPDKATKESLAKELQMTVKQVNNWFKHRRWSI
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT3G19510.1
Homeodomain
619
669
CKQTDPKTQRLYISFQENQYPDKATKESLAKELQMTVKQVNNWFKHRRWSI
AT3G19510.2
Homeodomain
619
669
CKQTDPKTQRLYISFQENQYPDKATKESLAKELQMTVKQVNNWFKHRRWSI
Links
Other
Homeodomain
family TFs
Other
Arabidopsis thaliana
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HAT3.1
Arabidopsis lyrata
fgenesh2_kg.3__2167__AT3G19510.1
I
0.634
Bostr.19424s0710
Boechera stricta
Bostr.19424s0710
I
0.614