HAT3.1 (Arabidopsis thaliana)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 AT3G19510 T204494_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes a member of the PHD-finger homeodomain protein family. The HAT3.1 homeodomain is highly divergent in sequence even at positions that are almost invariable among homeodomains. HAT3.1 shows a preference for the sequence T(A/G)(A/C)ACCA, different from those bound by other homeodomains.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HAT3.1
M02044_2.00		 Arabidopsis thaliana
NTRHACYNNN
NNNRGTDYAN		 PBM
Weirauch et al.(2014)
pTH7371		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02044_2.00 Homeodomain 51 101

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G19510.1 Homeodomain 619 669
AT3G19510.2 Homeodomain 619 669

Links

Other Homeodomain family TFs
Other Arabidopsis thaliana TFs

Invalid Input OrderBy

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action