CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
BGIOSGA000782
(
Oryza indica
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
BGIOSGA000782
T204676_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA000782-PA
Homeodomain
96
131
RKNYHRHTAEQIRIMEALFKESPHPDERQRQQAVQE
Links
Other
Homeodomain
family TFs
Other
Oryza indica
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OMERI01G28810
Oryza meridionalis
OMERI01G28810
N
0.867
OGLUM08G05340
Oryza glumaepatula
OGLUM08G05340
N
0.757
BGIOSGA028102
Oryza indica
BGIOSGA028102
N
0.757
OBART08G05070
Oryza barthii
OBART08G05070
N
0.757
ONIVA08G05020
Oryza nivara
ONIVA08G05020
N
0.757
ORUFI08G05670
Oryza rufipogon
ORUFI08G05670
N
0.757
OPUNC08G04870
Oryza punctata
OPUNC08G04870
N
0.757
GSMUA_Achr8G07310_001
Musa acuminata
GSMUA_Achr8G07310_001
N
0.757
LPERR08G04930
Leersia perrieri
LPERR08G04930
N
0.757
Solyc09g060160.1
Solanum lycopersicum
Solyc09g060160.1
N
0.709
GSMUA_Achr11G21700_001
Musa acuminata
GSMUA_Achr11G21700_001
N
0.704
VIT_13s0067g01580
Vitis vinifera
VIT_13s0067g01580
N
0.691
Pavir.Eb03234
Panicum virgatum
Pavir.Eb03234
N
0.689
Bra015119
Brassica rapa
Bra015119
N
0.662
VIT_14s0030g02130
Vitis vinifera
VIT_14s0030g02130
N
0.661
Rhox3e
Mus musculus
ENSMUSG00000059626
N
0.646
Rhox3f
Mus musculus
ENSMUSG00000095510
N
0.646
Rhox3a2
Mus musculus
ENSMUSG00000095601
N
0.646
Rhox3c
Mus musculus
ENSMUSG00000079636
N
0.646
Rhox3a
Mus musculus
ENSMUSG00000071772
N
0.646
Rhox3h
Mus musculus
ENSMUSG00000071769
N
0.646
PGSC0003DMG400012999
Solanum tuberosum
PGSC0003DMG400012999
N
0.611