BGIOSGA009878 (Oryza indica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 BGIOSGA009878 T204692_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
KNAT6
M02037_2.00
Arabidopsis thaliana
NNWGACNNNN

NNNNGTCWNN
PBM
Weirauch et al.(2014)
pTH7296
0.813 0.789
KNOX3_HORVU
M10790_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$KNOX3_01
0.809 0.842
GRMZM2G087741
M02138_2.00
Zea mays
NNTGACRKCN

NGMYGTCANN
PBM
Weirauch et al.(2014)
pTH5816
0.768 0.719
GRMZM2G135447
M02139_2.00
Zea mays
DTGACRKS

SMYGTCAH
PBM
Weirauch et al.(2014)
pTH6328
0.766 0.842
PK25034.1
M01254_2.00
Cannabis sativa
NNTGACRKBN

NVMYGTCANN
PBM
Lambert et al.(2019)
pTH11259
0.705 0.825
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA009878-PA Homeodomain 232 292

Links

Other Homeodomain family TFs
Other Oryza indica TFs

Invalid Input OrderBy

311 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action