CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo01061s030
(
Brassica oleracea
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
Bo01061s030
T204838_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KNOX3_HORVU
M10790_2.00
Hordeum vulgare
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$KNOX3_01
0.626
0.614
KNAT6
M02037_2.00
Arabidopsis thaliana
NNWGACNNNN
NNNNGTCWNN
PBM
Weirauch et al.(2014)
pTH7296
0.606
0.614
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo01061s030.1
Homeodomain
71
131
RKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWH
Links
Other
Homeodomain
family TFs
Other
Brassica oleracea
TFs
289 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy