CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra010573
(
Brassica rapa
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
Bra010573
T205071_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra010573.1-P
Homeodomain
54
98
FKKRKLTDEQMNMLEMSFCDEHKLESERKDKLAAELGLDPRQVAV
Links
Other
Homeodomain
family TFs
Other
Brassica rapa
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ATHB54
Arabidopsis lyrata
Al_scaffold_0001_2573
N
0.746
Traes_6BL_322DA92B5
Triticum aestivum
Traes_6BL_322DA92B5
N
0.690
cassava36221.valid.m1
Manihot esculenta
cassava36221.valid.m1
N
0.669
GLYMA04G34341
Glycine max
GLYMA04G34341
N
0.669
CRE22834
Caenorhabditis remanei
CRE22834
N
0.637
TRIUR3_23073
Triticum urartu
TRIUR3_23073
N
0.636
Lus10025232.g
Linum usitatissimum
Lus10025232.g
N
0.630