CBG24578 (Caenorhabditis briggsae)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 CBG24578 T205595_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CBG24578
M02065_2.00
Caenorhabditis briggsae
NNNTGACAKSTN

NASMTGTCANNN
PBM
Weirauch et al.(2014)
pTH6524
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02065_2.00 Homeodomain 1 58

DNA Binding Domains

Protein ID Domain From To Sequence
CBG24578 Homeodomain 553 610

Links

Other Homeodomain family TFs
Other Caenorhabditis briggsae TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
unc-62 Caenorhabditis elegans WBGene00006796 D 0.866
Bm10123 Brugia malayi Bm10123 I 0.599
L892_g28686 Steinernema scapterisci L892_g28686 I 0.855
L893_g8903 Steinernema glaseri L893_g8903 I 0.855
nAv.1.0.1.g05377 Acanthocheilonema viteae nAv.1.0.1.g05377 I 0.599
nDi.2.2.2.g04955 Dirofilaria immitis nDi.2.2.2.g04955 I 0.599
nLs.2.1.2.g05683 Litomosoides sigmodontis nLs.2.1.2.g05683 I 0.599
PTRK_0001375800 Parastrongyloides trichosuri PTRK_0001375800 I 0.855
SPAL_0001594500 Strongyloides papillosus SPAL_0001594500 I 0.855
SSTP_0001175600 Strongyloides stercoralis SSTP_0001175600 I 0.855
L596_g16822 Steinernema carpocapsae L596_g16822 I 0.855
GPLIN_000275800 Globodera pallida GPLIN_000275800 I 0.707
CJA02489 Caenorhabditis japonica CJA02489 I 0.867
CRE18960 Caenorhabditis remanei CRE18960 I 0.867
SLOPH_443 Spraguea lophii SLOPH_443 I 0.618
WBGene00242324 Onchocerca volvulus WBGene00242324 I 0.599
XP_002647234.1 Caenorhabditis briggsae XP_002647234.1 I 0.867
fgenesh2_pg.scaffold_23000011 Monosiga brevicollis fgenesh2_pg.scaffold_23000011 I 0.646
ASU_10550 Ascaris suum ASU_10550 I 0.867
BTMF_0000901301 Brugia timori BTMF_0000901301 I 0.599
SVE_0999800 Strongyloides venezuelensis SVE_0999800 I 0.855