CBN08622 (Caenorhabditis brenneri)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 CBN08622 T205655_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ceh-5
M02179_2.00
Caenorhabditis elegans
NNTAATDDN

NHHATTANN
PBM
Weirauch et al.(2014)
pTH6562
0.861 0.912
VAX2
M00284_2.00
Homo sapiens
NNTAATND

HNATTANN
PBM
Barrera et al.(2016)
VAX2_REF
0.795 0.614
Vax1
M00398_2.00
Mus musculus
NTAATNDNN

NNHNATTAN
PBM
Berger et al.(2008)
Vax1_3499
0.795 0.614
Vax2
M00464_2.00
Mus musculus
NTAATDDNN

NNHHATTAN
PBM
Berger et al.(2008)
Vax2_3500
0.795 0.614
VAX2
M03119_2.00
Homo sapiens
YTAATKAN

NTMATTAR
SELEX
Jolma et al.(2013)
VAX2_1
0.795 0.614
VAX2
M05030_2.00
Homo sapiens
BTAATTRV

BYAATTAV
SELEX
Yin et al.(2017)
VAX2_FL_HT-SELEX
0.795 0.614
Vax1
M10764_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VAX1_04
0.795 0.614
VAX2
M05031_2.00
Homo sapiens
BTAATTRV

BYAATTAV
SELEX
Yin et al.(2017)
VAX2_FL_Methyl-HT-SELEX
0.795 0.614
VAX2
M00283_2.00
Homo sapiens
NNTAAWNDNN

NNHNWTTANN
PBM
Barrera et al.(2016)
VAX2_L139M
0.789 0.596
EMX1
M02088_2.00
Homo sapiens
NNTAATKANN

NNTMATTANN
PBM
Weirauch et al.(2014)
pTH5677
0.769 0.614
EMX1
M03151_2.00
Homo sapiens
NBTAATTRNN

NNYAATTAVN
SELEX
Jolma et al.(2013)
EMX1_1
0.769 0.614
EMX1
M03152_2.00
Homo sapiens
YMATTARYTAATKR

YMATTARYTAATKR
SELEX
Jolma et al.(2013)
EMX1_2
0.769 0.614
EMX1
M05145_2.00
Homo sapiens
BTAATTAN

NTAATTAV
SELEX
Yin et al.(2017)
EMX1_eDBD_HT-SELEX
0.769 0.614
EMX1
M05147_2.00
Homo sapiens
BTAATTAV

BTAATTAV
SELEX
Yin et al.(2017)
EMX1_FL_HT-SELEX
0.769 0.614
EMX1
M05146_2.00
Homo sapiens
BTAATTRN

NYAATTAV
SELEX
Yin et al.(2017)
EMX1_eDBD_Methyl-HT-SELEX
0.769 0.614
EMX1
M05148_2.00
Homo sapiens
BTAATTAN

NTAATTAV
SELEX
Yin et al.(2017)
EMX1_FL_Methyl-HT-SELEX
0.769 0.614
Emx2
M00495_2.00
Mus musculus
NTAATDDNN

NNHHATTAN
PBM
Berger et al.(2008)
Emx2_3420
0.769 0.579
EMX2
M03210_2.00
Homo sapiens
NBTAATTANN

NNTAATTAVN
SELEX
Jolma et al.(2013)
EMX2_1
0.769 0.579
EMX2
M03211_2.00
Homo sapiens
YMATTARBTAATKR

YMATTAVYTAATKR
SELEX
Jolma et al.(2013)
EMX2_2
0.769 0.579
EMX2
M05281_2.00
Homo sapiens
YTAATKAB

VTMATTAR
SELEX
Yin et al.(2017)
EMX2_eDBD_HT-SELEX
0.769 0.579
EMX2
M05282_2.00
Homo sapiens
YTAATKAN

NTMATTAR
SELEX
Yin et al.(2017)
EMX2_eDBD_Methyl-HT-SELEX
0.769 0.579
ems
M02114_2.00
Drosophila melanogaster
NTAATKRNB

VNYMATTAN
PBM
Weirauch et al.(2014)
pTH5673
0.757 0.596
ems
M03789_2.00
Drosophila melanogaster
BTAATTAN

NTAATTAV
SELEX
Nitta et al.(2015)
ems_1
0.757 0.596
ems
M03790_2.00
Drosophila melanogaster
BTAATTAVBVBTAATKRN

NYMATTAVBVBTAATTAV
SELEX
Nitta et al.(2015)
ems_2
0.757 0.596
ems
M03791_2.00
Drosophila melanogaster
BTAATKRN

NYMATTAV
SELEX
Nitta et al.(2015)
ems_3
0.757 0.596
ems
M03792_2.00
Drosophila melanogaster
STAATKRSSSSTAATKRV

BYMATTASSSSYMATTAS
SELEX
Nitta et al.(2015)
ems_4
0.757 0.596
ems
M06484_2.00
Drosophila melanogaster
HTAATKR

YMATTAD
B1H
Mathelier et al.(2014)
MA0219.1
0.757 0.596
ems
M06233_2.00
Drosophila melanogaster
WHTAATKR

YMATTADW
B1H
Zhu et al.(2011)
Ems_Cell_FBgn0000576
0.757 0.596
ems
M06234_2.00
Drosophila melanogaster
TSTMATHM

KDATKASA
B1H
Zhu et al.(2011)
ems_FlyReg_FBgn0000576
0.757 0.596
ems
M06235_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Zhu et al.(2011)
Ems_SOLEXA_FBgn0000576
0.757 0.596
ems
M09676_2.00
Drosophila melanogaster
WTWATGA

TCATWAW
Misc
Kulakovskiy et al.(2009)
ems
0.757 0.596
E5
M03814_2.00
Drosophila melanogaster
STAATKNN

NNMATTAS
SELEX
Nitta et al.(2015)
E5_1
0.757 0.579
E5
M06507_2.00
Drosophila melanogaster
BTAATKA

TMATTAV
B1H
Mathelier et al.(2014)
MA0189.1
0.757 0.579
E5
M06293_2.00
Drosophila melanogaster
NBTAATKA

TMATTAVN
B1H
Zhu et al.(2011)
E5_Cell_FBgn0008646
0.757 0.579
E5
M06294_2.00
Drosophila melanogaster
NTAATDR

YHATTAN
B1H
Zhu et al.(2011)
E5_SOLEXA_FBgn0008646
0.757 0.579
Nkx1-1
M00442_2.00
Mus musculus
NNTAATNDNN

NNHNATTANN
PBM
Berger et al.(2008)
Nkx1-1_3856
0.733 0.579
Nkx1-2
M00503_2.00
Mus musculus
NNTAAWNDN

NHNWTTANN
PBM
Berger et al.(2008)
Nkx1-2_3214
0.733 0.579
slou
M00557_2.00
Drosophila melanogaster
NNTAATDRN

NYHATTANN
PBM
Busser et al.(2012a)
Slou
0.733 0.579
slou
M03798_2.00
Drosophila melanogaster
VBTAATTRSB

VSYAATTAVB
SELEX
Nitta et al.(2015)
slou_1
0.733 0.579
slou
M06494_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Mathelier et al.(2014)
MA0245.1
0.733 0.579
slou
M06262_2.00
Drosophila melanogaster
BYTAATKR

YMATTARV
B1H
Zhu et al.(2011)
Slou_Cell_FBgn0002941
0.733 0.579
slou
M06263_2.00
Drosophila melanogaster
HTAATKR

YMATTAD
B1H
Zhu et al.(2011)
Slou_SOLEXA_FBgn0002941
0.733 0.579
CG18599
M06539_2.00
Drosophila melanogaster
HTAATKA

TMATTAD
B1H
Mathelier et al.(2014)
MA0177.1
0.705 0.561
CG18599
M06354_2.00
Drosophila melanogaster
HTAATKA

TMATTAD
B1H
Zhu et al.(2011)
CG18599_Cell_FBgn0038592
0.705 0.561
CG18599
M06355_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Zhu et al.(2011)
CG18599_SOLEXA_FBgn0038592
0.705 0.561
NEMVEDRAFT_v1g205636
M02150_2.00
Nematostella vectensis
NTAATTAN

NTAATTAN
PBM
Weirauch et al.(2014)
pTH5491
0.698 0.526
lms
M03863_2.00
Drosophila melanogaster
BTAATTRV

BYAATTAV
SELEX
Nitta et al.(2015)
CG13424_1
0.693 0.526
lms
M03864_2.00
Drosophila melanogaster
HTWATTRDWTDATTRR

YYAATHAWHYAATWAD
SELEX
Nitta et al.(2015)
lms_1
0.693 0.526
lms
M06536_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Mathelier et al.(2014)
MA0175.1
0.693 0.526
lms
M06347_2.00
Drosophila melanogaster
NYTAATKR

YMATTARN
B1H
Zhu et al.(2011)
CG13424_Cell_FBgn0034520
0.693 0.526
lms
M06348_2.00
Drosophila melanogaster
NNHTAATDRN

NYHATTADNN
B1H
Zhu et al.(2011)
CG13424_SOLEXA_2_FBgn0034520
0.693 0.526
lms
M06349_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Zhu et al.(2011)
CG13424_SOLEXA_FBgn0034520
0.693 0.526
Barhl1
M00433_2.00
Mus musculus
NTAAWNRNN

NNYNWTTAN
PBM
Berger et al.(2008)
Barhl1_2590
0.688 0.561
Barhl1
M03258_2.00
Mus musculus
NNTAAWYGNH

DNCRWTTANN
SELEX
Jolma et al.(2013)
Barhl1_1
0.688 0.561
Barhl1
M03259_2.00
Mus musculus
NNTAADNRNN

NNYNHTTANN
SELEX
Jolma et al.(2013)
Barhl1_2
0.688 0.561
Barhl1
M03260_2.00
Mus musculus
TAAWYGNYNNTAAWYG

CRWTTANNRNCRWTTA
SELEX
Jolma et al.(2013)
Barhl1_3
0.688 0.561
BARHL1
M05091_2.00
Homo sapiens
NTAAWYGN

NCRWTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_HT-SELEX_1
0.688 0.561
BARHL1
M05092_2.00
Homo sapiens
NTAADBGN

NCVHTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_HT-SELEX_2
0.688 0.561
BARHL1
M05093_2.00
Homo sapiens
NTAADKGN

NCMHTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_Methyl-HT-SELEX
0.688 0.561
ind
M06527_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Mathelier et al.(2014)
MA0228.1
0.688 0.579
ind
M06329_2.00
Drosophila melanogaster
YVYTAATKA

TMATTARBR
B1H
Zhu et al.(2011)
Ind_Cell_FBgn0025776
0.688 0.579
CG11085
M03857_2.00
Drosophila melanogaster
BTAAWYGN

NCRWTTAV
SELEX
Nitta et al.(2015)
CG11085_1
0.679 0.561
CG11085
M03858_2.00
Drosophila melanogaster
NTAAWCGN

NCGWTTAN
SELEX
Nitta et al.(2015)
CG11085_2
0.679 0.561
CG11085
M06532_2.00
Drosophila melanogaster
TTAATDG

CHATTAA
B1H
Mathelier et al.(2014)
MA0171.1
0.679 0.561
CG11085
M06339_2.00
Drosophila melanogaster
NTTAATDGV

BCHATTAAN
B1H
Zhu et al.(2011)
CG11085_Cell_FBgn0030408
0.679 0.561
CG11085
M06340_2.00
Drosophila melanogaster
NHTAAWBRNN

NNYVWTTADN
B1H
Zhu et al.(2011)
CG11085_SOLEXA_FBgn0030408
0.679 0.561
Pdx1
M00446_2.00
Mus musculus
NWRAYNNN

NNNRTYWN
PBM
Berger et al.(2008)
Ipf1_3815
0.676 0.474
SPU_026099
M02175_2.00
Strongylocentrotus purpuratus
KTAATTRB

VYAATTAM
PBM
Weirauch et al.(2014)
pTH6140
0.676 0.474
PDX1
M03155_2.00
Homo sapiens
NTAATTRNNNYTAATTRN

NYAATTARNNNYAATTAN
SELEX
Jolma et al.(2013)
PDX1_1
0.676 0.474
PDX1
M03156_2.00
Homo sapiens
BTAATKRN

NYMATTAV
SELEX
Jolma et al.(2013)
PDX1_2
0.676 0.474
PDX1
M05161_2.00
Homo sapiens
YTAATKRB

VYMATTAR
SELEX
Yin et al.(2017)
PDX1_eDBD_HT-SELEX
0.676 0.474
PDX1
M09147_2.00
Homo sapiens
TGATWGATK

MATCWATCA
Misc
Kulakovskiy et al.(2013)
PDX1_HUMAN.H11MO.0.A
0.676 0.474
Pdx1
M09192_2.00
Mus musculus
VYTAATGRB

VYCATTARB
Misc
Kulakovskiy et al.(2013)
PDX1_MOUSE.H11MO.0.B
0.676 0.474
Pdx1
M09571_2.00
Mus musculus
TGATTRATKR

YMATYAATCA
Misc
Heinz et al.(2010)
Islet-Pdx1_SRA008281
0.676 0.474
PDX1
M10699_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_01
0.676 0.474
PDX1
M10700_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_02
0.676 0.474
PDX1
M10701_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_03
0.676 0.474
PDX1
M10702_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_04
0.676 0.474
PDX1
M10703_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_05
0.676 0.474
PDX1
M10704_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q4_01
0.676 0.474
PDX1
M10705_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q4
0.676 0.474
PDX1
M10706_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q5_01
0.676 0.474
PDX1
M10707_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q5
0.676 0.474
PDX1
M10708_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q6
0.676 0.474
PDX1
M05162_2.00
Homo sapiens
HTAAYGAB

VTCRTTAD
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_1
0.676 0.474
PDX1
M05163_2.00
Homo sapiens
YTAATKRB

VYMATTAR
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_2
0.676 0.474
B-H1
M03829_2.00
Drosophila melanogaster
VNTAAWYGNN

NNCRWTTANB
SELEX
Nitta et al.(2015)
B-H1_1
0.676 0.544
B-H1
M03830_2.00
Drosophila melanogaster
SNTAADBGN

NCVHTTANS
SELEX
Nitta et al.(2015)
B-H1_2
0.676 0.544
B-H2
M03810_2.00
Drosophila melanogaster
VNTAAAYGNH

DNCRTTTANB
SELEX
Nitta et al.(2015)
B-H2_1
0.676 0.544
B-H2
M03811_2.00
Drosophila melanogaster
SNTAADBGN

NCVHTTANS
SELEX
Nitta et al.(2015)
B-H2_2
0.676 0.544
B-H2
M06503_2.00
Drosophila melanogaster
WTAATTG

CAATTAW
B1H
Mathelier et al.(2014)
MA0169.1
0.676 0.544
B-H1
M06512_2.00
Drosophila melanogaster
HTAAWYG

CRWTTAD
B1H
Mathelier et al.(2014)
MA0168.1
0.676 0.544
Barhl2
M00460_2.00
Mus musculus
NTAAWNRNN

NNYNWTTAN
PBM
Berger et al.(2008)
Barhl2_3868
0.676 0.526
BARHL2
M03157_2.00
Homo sapiens
NNTAAWYGNN

NNCRWTTANN
SELEX
Jolma et al.(2013)
BARHL2_1
0.676 0.526
BARHL2
M03158_2.00
Homo sapiens
NNTAAWBGNN

NNCVWTTANN
SELEX
Jolma et al.(2013)
BARHL2_2
0.676 0.526
BARHL2
M03159_2.00
Homo sapiens
TAAWYGNNNNTAAWYR

YRWTTANNNNCRWTTA
SELEX
Jolma et al.(2013)
BARHL2_3
0.676 0.526
BARHL2
M03160_2.00
Homo sapiens
NNTAAWYGNH

DNCRWTTANN
SELEX
Jolma et al.(2013)
BARHL2_4
0.676 0.526
BARHL2
M03161_2.00
Homo sapiens
NNTAAWYGNN

NNCRWTTANN
SELEX
Jolma et al.(2013)
BARHL2_5
0.676 0.526
BARHL2
M03162_2.00
Homo sapiens
TAAWYGNYNHTAAWYG

CRWTTADNRNCRWTTA
SELEX
Jolma et al.(2013)
BARHL2_6
0.676 0.526
BARHL2
M05164_2.00
Homo sapiens
HTAAAYGNY

RNCRTTTAD
SELEX
Yin et al.(2017)
BARHL2_eDBD_HT-SELEX_1
0.676 0.526
BARHL2
M05165_2.00
Homo sapiens
NTAAWTGNB

VNCAWTTAN
SELEX
Yin et al.(2017)
BARHL2_eDBD_HT-SELEX_2
0.676 0.526
BARHL2
M05167_2.00
Homo sapiens
NTAAWYGN

NCRWTTAN
SELEX
Yin et al.(2017)
BARHL2_FL_HT-SELEX_1
0.676 0.526
BARHL2
M05168_2.00
Homo sapiens
NTAAWYGN

NCRWTTAN
SELEX
Yin et al.(2017)
BARHL2_FL_HT-SELEX_2
0.676 0.526
BARHL2
M05166_2.00
Homo sapiens
NTAAWTGNB

VNCAWTTAN
SELEX
Yin et al.(2017)
BARHL2_eDBD_Methyl-HT-SELEX
0.676 0.526
BARHL2
M05169_2.00
Homo sapiens
NTAAWTGN

NCAWTTAN
SELEX
Yin et al.(2017)
BARHL2_FL_Methyl-HT-SELEX
0.676 0.526
en
M03793_2.00
Drosophila melanogaster
NTAATTRN

NYAATTAN
SELEX
Nitta et al.(2015)
en_1
0.674 0.509
en
M06485_2.00
Drosophila melanogaster
YTAATTR

YAATTAR
B1H
Mathelier et al.(2014)
MA0220.1
0.674 0.509
en
M06236_2.00
Drosophila melanogaster
NYTAATTR

YAATTARN
B1H
Zhu et al.(2011)
En_Cell_FBgn0000577
0.674 0.509
en
M06237_2.00
Drosophila melanogaster
DBTAATKR

YMATTAVH
B1H
Zhu et al.(2011)
en_FlyReg_FBgn0000577
0.674 0.509
en
M06238_2.00
Drosophila melanogaster
NNNTAATTRN

NYAATTANNN
B1H
Zhu et al.(2011)
en_SOLEXA_2_FBgn0000577
0.674 0.509
en
M06239_2.00
Drosophila melanogaster
NTAATTR

YAATTAN
B1H
Zhu et al.(2011)
En_SOLEXA_FBgn0000577
0.674 0.509
en
M09677_2.00
Drosophila melanogaster
HTAATTRN

NYAATTAD
Misc
Kulakovskiy et al.(2009)
en
0.674 0.509
en
M10785_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$EN_Q6
0.674 0.509
inv
M06491_2.00
Drosophila melanogaster
DYTAATTR

YAATTARH
B1H
Mathelier et al.(2014)
MA0229.1
0.674 0.474
inv
M06255_2.00
Drosophila melanogaster
DYTAATTR

YAATTARH
B1H
Zhu et al.(2011)
Inv_Cell_FBgn0001269
0.674 0.474
inv
M06256_2.00
Drosophila melanogaster
NHTAATTRV

BYAATTADN
B1H
Zhu et al.(2011)
inv_SOLEXA_2_FBgn0001269
0.674 0.474
inv
M06257_2.00
Drosophila melanogaster
NHTAATTRV

BYAATTADN
B1H
Zhu et al.(2011)
inv_SOLEXA_5_FBgn0001269
0.674 0.474
En2
M00484_2.00
Mus musculus
NNYHATHN

NDATDRNN
PBM
Berger et al.(2008)
En2_0952
0.674 0.509
EN2
M03189_2.00
Homo sapiens
NNTAATTRNN

NNYAATTANN
SELEX
Jolma et al.(2013)
EN2_1
0.674 0.509
EN2
M03190_2.00
Homo sapiens
VBTAATTRNN

NNYAATTAVB
SELEX
Jolma et al.(2013)
EN2_2
0.674 0.509
En2
M03276_2.00
Mus musculus
VBTAATTASN

NSTAATTAVB
SELEX
Jolma et al.(2013)
En2_1
0.674 0.509
EN2
M05237_2.00
Homo sapiens
BTAATTRV

BYAATTAV
SELEX
Yin et al.(2017)
EN2_eDBD_HT-SELEX
0.674 0.509
EN2
M05238_2.00
Homo sapiens
VHTDAYGHB

VDCRTHADB
SELEX
Yin et al.(2017)
EN2_eDBD_Methyl-HT-SELEX_1
0.674 0.509
EN2
M05239_2.00
Homo sapiens
BTAATTRV

BYAATTAV
SELEX
Yin et al.(2017)
EN2_eDBD_Methyl-HT-SELEX_2
0.674 0.509
En1
M00519_2.00
Mus musculus
HNWTNNN

NNNAWND
PBM
Berger et al.(2008)
En1_3123
0.674 0.491
EN1
M03180_2.00
Homo sapiens
NNTAATTRVB

VBYAATTANN
SELEX
Jolma et al.(2013)
EN1_1
0.674 0.491
EN1
M03181_2.00
Homo sapiens
TAATTRSNYAATTA

TAATTRNSYAATTA
SELEX
Jolma et al.(2013)
EN1_2
0.674 0.491
EN1
M03182_2.00
Homo sapiens
BTAATTRN

NYAATTAV
SELEX
Jolma et al.(2013)
EN1_3
0.674 0.491
EN1
M03183_2.00
Homo sapiens
TDAKKRSNYMATTA

TAATKRNSYMMTHA
SELEX
Jolma et al.(2013)
EN1_4
0.674 0.491
EN1
M05218_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
EN1_eDBD_HT-SELEX
0.674 0.491
EN1
M05871_2.00
Homo sapiens
VNYAATTA

TAATTRNB
SMiLE-seq
Isakova et al.(2017)
EN1
0.674 0.491
EN1
M10714_2.00
Homo sapiens
RTDDTBB

VVAHHAY
Transfac
Matys et al.(2006)
V$EN1_01
0.674 0.491
EN1
M05219_2.00
Homo sapiens
NTAAYGAB

VTCRTTAN
SELEX
Yin et al.(2017)
EN1_eDBD_Methyl-HT-SELEX_1
0.674 0.491
EN1
M05220_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
EN1_eDBD_Methyl-HT-SELEX_2
0.674 0.491
TLX3
M05233_2.00
Homo sapiens
NAATKGNNNNNNNNNNNNNCAATTN

NAATTGNNNNNNNNNNNNNCMATTN
SELEX
Yin et al.(2017)
TLX3_eDBD_HT-SELEX
0.673 0.526
TLX3
M05235_2.00
Homo sapiens
NAATTGNNNNNHNNNNCAATTN

NAATTGNNNNDNNNNNCAATTN
SELEX
Yin et al.(2017)
TLX3_FL_HT-SELEX
0.673 0.526
TLX3
M05234_2.00
Homo sapiens
NAATTGNNNNNNNNNNDCAATTD

HAATTGHNNNNNNNNNNCAATTN
SELEX
Yin et al.(2017)
TLX3_eDBD_Methyl-HT-SELEX
0.673 0.526
TLX3
M05236_2.00
Homo sapiens
HAATTRNNNNNNNNNYHATTV

BAATDRNNNNNNNNNYAATTD
SELEX
Yin et al.(2017)
TLX3_FL_Methyl-HT-SELEX
0.673 0.526
ENSTNIG00000006040
M02106_2.00
Tetraodon nigroviridis
NNNBTAAWHRBNN

NNVYDWTTAVNNN
PBM
Weirauch et al.(2014)
pTH6503
0.672 0.526
Gsx2
M00469_2.00
Mus musculus
NTAATDDNN

NNHHATTAN
PBM
Berger et al.(2008)
Gsh2_3990
0.671 0.561
GSX1
M03205_2.00
Homo sapiens
NNTAATKRNN

NNYMATTANN
SELEX
Jolma et al.(2013)
GSX1_1
0.671 0.561
GSX2
M03227_2.00
Homo sapiens
NNTAATKRNN

NNYMATTANN
SELEX
Jolma et al.(2013)
GSX2_1
0.671 0.561
GSX1
M05271_2.00
Homo sapiens
NYMATNRN

NYNATKRN
SELEX
Yin et al.(2017)
GSX1_eDBD_HT-SELEX
0.671 0.561
GSX2
M05329_2.00
Homo sapiens
HTAATKRS

SYMATTAD
SELEX
Yin et al.(2017)
GSX2_eDBD_HT-SELEX
0.671 0.561
GSX1
M05272_2.00
Homo sapiens
NTAAYGAB

VTCRTTAN
SELEX
Yin et al.(2017)
GSX1_eDBD_Methyl-HT-SELEX
0.671 0.561
GSX2
M05330_2.00
Homo sapiens
HTAAYGAB

VTCRTTAD
SELEX
Yin et al.(2017)
GSX2_eDBD_Methyl-HT-SELEX
0.671 0.561
zen
M03805_2.00
Drosophila melanogaster
BTAATKRB

VYMATTAV
SELEX
Nitta et al.(2015)
zen_1
0.671 0.509
zen
M06500_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Mathelier et al.(2014)
MA0256.1
0.671 0.509
zen
M06276_2.00
Drosophila melanogaster
NBYTAATKA

TMATTARBN
B1H
Zhu et al.(2011)
Zen_Cell_FBgn0004053
0.671 0.509
zen
M06277_2.00
Drosophila melanogaster
AANWTWAWTG

CAWTWAWNTT
B1H
Zhu et al.(2011)
zen_FlyReg_FBgn0004053
0.671 0.509
zen
M06278_2.00
Drosophila melanogaster
NYTAATKA

TMATTARN
B1H
Zhu et al.(2011)
Zen_SOLEXA_FBgn0004053
0.671 0.509
Hoxb3
M00504_2.00
Mus musculus
NTAATKRNN

NNYMATTAN
PBM
Berger et al.(2008)
Hoxb3_1720
0.671 0.491
HOXB3
M03126_2.00
Homo sapiens
NBTAATKRNN

NNYMATTAVN
SELEX
Jolma et al.(2013)
HOXB3_1
0.671 0.491
Hoxd3
M00531_2.00
Mus musculus
NTAATNDN

NHNATTAN
PBM
Berger et al.(2008)
Hoxd3_1742
0.671 0.474
Hoxa3
M00172_2.00
Mus musculus
NTAATKRNNN

NNNYMATTAN
PBM
Badis et al.(2009)
Hoxa3_2783
0.671 0.474
Hoxa3
M00532_2.00
Mus musculus
NTAATKRNN

NNYMATTAN
PBM
Berger et al.(2008)
Hoxa3_2783
0.671 0.474
Hoxd3
M03287_2.00
Mus musculus
NNTAATKRNN

NNYMATTANN
SELEX
Jolma et al.(2013)
Hoxd3_1
0.671 0.474
HOXD3
M05101_2.00
Homo sapiens
CTAATTAS

STAATTAG
SELEX
Yin et al.(2017)
HOXD3_FL_HT-SELEX
0.671 0.474
HOXA3
M10651_2.00
Homo sapiens
SVTWNDDKB

VMHHNWABS
Transfac
Matys et al.(2006)
V$HOXA3_01
0.671 0.474
HOXD3
M05102_2.00
Homo sapiens
YTAAYGAY

RTCRTTAR
SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_1
0.671 0.474
HOXD3
M05103_2.00
Homo sapiens
CTAATKAC

GTMATTAG
SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_2
0.671 0.474
zen2
M02118_2.00
Drosophila melanogaster
NNTAATKRNN

NNYMATTANN
PBM
Weirauch et al.(2014)
pTH5479
0.670 0.491
zen2
M03806_2.00
Drosophila melanogaster
BTAATKAS

STMATTAV
SELEX
Nitta et al.(2015)
zen2_1
0.670 0.491
zen2
M03807_2.00
Drosophila melanogaster
BTAATKWNNVRNNNNYBNNWMATTAV

BTAATKWNNVRNNNNYBNNWMATTAV
SELEX
Nitta et al.(2015)
zen2_2
0.670 0.491
zen2
M06501_2.00
Drosophila melanogaster
BTAATKA

TMATTAV
B1H
Mathelier et al.(2014)
MA0257.1
0.670 0.491
zen2
M06279_2.00
Drosophila melanogaster
HNBTAATKA

TMATTAVND
B1H
Zhu et al.(2011)
Zen2_Cell_FBgn0004054
0.670 0.491
zen2
M06280_2.00
Drosophila melanogaster
NNNTAATKRN

NYMATTANNN
B1H
Zhu et al.(2011)
zen2_SOLEXA_2_FBgn0004054
0.670 0.491
zen2
M06281_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Zhu et al.(2011)
Zen2_SOLEXA_FBgn0004054
0.670 0.491
NEMVEDRAFT_v1g8907
M02154_2.00
Nematostella vectensis
NTAATDRNNN

NNNYHATTAN
PBM
Weirauch et al.(2014)
pTH6483
0.666 0.561
NOTO
M03241_2.00
Homo sapiens
NNTAATKWRN

NYWMATTANN
SELEX
Jolma et al.(2013)
NOTO_1
0.666 0.561
NOTO
M05390_2.00
Homo sapiens
BTAATKRV

BYMATTAV
SELEX
Yin et al.(2017)
NOTO_eDBD_HT-SELEX
0.666 0.561
NOTO
M05391_2.00
Homo sapiens
BTMATKRV

BYMATKAV
SELEX
Yin et al.(2017)
NOTO_eDBD_Methyl-HT-SELEX
0.666 0.561
Q0N4M8_NEMVE
M02166_2.00
Nematostella vectensis
HTAATKAC

GTMATTAD
PBM
Weirauch et al.(2014)
pTH6215
0.665 0.474
TLX2
M02087_2.00
Homo sapiens
NYRDNNNNNN

NNNNNNHYRN
PBM
Weirauch et al.(2014)
pTH6482
0.661 0.526
Tlx2
M00526_2.00
Mus musculus
WTTAAWTA

TAWTTAAW
PBM
Berger et al.(2008)
Tlx2_3498
0.661 0.526
TLX2
M05020_2.00
Homo sapiens
BTAATTRN

NYAATTAV
SELEX
Yin et al.(2017)
TLX2_eDBD_HT-SELEX
0.661 0.526
C15
M06505_2.00
Drosophila melanogaster
TTAAWKR

YMWTTAA
B1H
Mathelier et al.(2014)
MA0170.1
0.661 0.526
C15
M06289_2.00
Drosophila melanogaster
BTTAAWKR

YMWTTAAV
B1H
Zhu et al.(2011)
C15_Cell_FBgn0004863
0.661 0.526
C15
M06290_2.00
Drosophila melanogaster
NWTAAWKR

YMWTTAWN
B1H
Zhu et al.(2011)
C15_SOLEXA_FBgn0004863
0.661 0.526
TLX2
M10672_2.00
Homo sapiens
BNGTAAKDNB

VNHMTTACNV
Transfac
Matys et al.(2006)
V$NCX_01
0.661 0.526
TLX2
M05021_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
TLX2_eDBD_Methyl-HT-SELEX
0.661 0.526
Barx1
M00413_2.00
Mus musculus
NNTAAYBDNN

NNHVRTTANN
PBM
Berger et al.(2008)
Barx1_2877
0.657 0.596
barx1
M02107_2.00
Tetraodon nigroviridis
NTAAYNNNN

NNNNRTTAN
PBM
Weirauch et al.(2014)
pTH6449
0.657 0.596
BARX1
M03144_2.00
Homo sapiens
TAATBGNWWWTTAATBR

YVATTAAWWWNCVATTA
SELEX
Jolma et al.(2013)
BARX1_1
0.657 0.596
BARX1
M03145_2.00
Homo sapiens
NTAATBRN

NYVATTAN
SELEX
Jolma et al.(2013)
BARX1_2
0.657 0.596
Barx1
M09181_2.00
Mus musculus
NNWAAKKGYTWH

DWARCMMTTWNN
Misc
Kulakovskiy et al.(2013)
BARX1_MOUSE.H11MO.0.C
0.657 0.596
Otp
M00417_2.00
Mus musculus
NNHAATND

HNATTDNN
PBM
Berger et al.(2008)
Otp_3496
0.656 0.509
NEMVEDRAFT_v1g81309
M02152_2.00
Nematostella vectensis
NTAATDNNN

NNNHATTAN
PBM
Weirauch et al.(2014)
pTH5477
0.652 0.544
otp
M03834_2.00
Drosophila melanogaster
BTAATTRN

NYAATTAV
SELEX
Nitta et al.(2015)
otp_1
0.652 0.491
otp
M03835_2.00
Drosophila melanogaster
YTAATTRV

BYAATTAR
SELEX
Nitta et al.(2015)
otp_2
0.652 0.491
otp
M06516_2.00
Drosophila melanogaster
YTAATTA

TAATTAR
B1H
Mathelier et al.(2014)
MA0236.1
0.652 0.491
otp
M06309_2.00
Drosophila melanogaster
HYTAATTA

TAATTARD
B1H
Zhu et al.(2011)
Otp_Cell_FBgn0015524
0.652 0.491
otp
M06310_2.00
Drosophila melanogaster
YTAATTR

YAATTAR
B1H
Zhu et al.(2011)
Otp_SOLEXA_FBgn0015524
0.652 0.491
NK7.1
M03847_2.00
Drosophila melanogaster
VTTAAAYGDTD

HAHCRTTTAAB
SELEX
Nitta et al.(2015)
NK7.1_1
0.650 0.491
NK7.1
M03848_2.00
Drosophila melanogaster
NSTTAATTGVY

RBCAATTAASN
SELEX
Nitta et al.(2015)
NK7.1_2
0.650 0.491
NK7.1
M06524_2.00
Drosophila melanogaster
TTAATDR

YHATTAA
B1H
Mathelier et al.(2014)
MA0196.1
0.650 0.491
NK7.1
M06323_2.00
Drosophila melanogaster
NTTAATDR

YHATTAAN
B1H
Zhu et al.(2011)
NK7.1_Cell_FBgn0024321
0.650 0.491
NK7.1
M06324_2.00
Drosophila melanogaster
YTAATDR

YHATTAR
B1H
Zhu et al.(2011)
NK7.1_SOLEXA_FBgn0024321
0.650 0.491
pb
M03872_2.00
Drosophila melanogaster
NTRAYKRY

RYMRTYAN
SELEX
Nitta et al.(2015)
pb_1
0.648 0.491
pb
M06545_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Mathelier et al.(2014)
MA0238.1
0.648 0.491
pb
M06366_2.00
Drosophila melanogaster
BYTAATKA

TMATTARV
B1H
Zhu et al.(2011)
Pb_Cell_FBgn0051481
0.648 0.491
pb
M06367_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Zhu et al.(2011)
Pb_SOLEXA_FBgn0051481
0.648 0.491
Noto
M02101_2.00
Mus musculus
NNHHATDDNN

NNHHATDDNN
PBM
Weirauch et al.(2014)
pTH6268
0.646 0.509
Hoxd1
M00492_2.00
Mus musculus
NRATNDNN

NNHNATYN
PBM
Berger et al.(2008)
Hoxd1_3448
0.644 0.509
HOXD1
M05098_2.00
Homo sapiens
BTAATTAV

BTAATTAV
SELEX
Yin et al.(2017)
HOXD1_eDBD_HT-SELEX
0.644 0.509
Hoxd1
M10768_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXD1_03
0.644 0.509
HOXD1
M05099_2.00
Homo sapiens
BTAATKAV

BTMATTAV
SELEX
Yin et al.(2017)
HOXD1_eDBD_Methyl-HT-SELEX_1
0.644 0.509
HOXD1
M05100_2.00
Homo sapiens
NTWAYGAB

VTCRTWAN
SELEX
Yin et al.(2017)
HOXD1_eDBD_Methyl-HT-SELEX_2
0.644 0.509
Barx2
M00457_2.00
Mus musculus
NTAABNDNN

NNHNVTTAN
PBM
Berger et al.(2008)
Barx2_3447
0.644 0.544
BARX2
M04915_2.00
Homo sapiens
NTAAYKRTTWWN

NWWAAYMRTTAN
SELEX
Yin et al.(2017)
BARX2_FL_HT-SELEX
0.644 0.544
BARX2
M04916_2.00
Homo sapiens
NTAAYKRTTWWN

NWWAAYMRTTAN
SELEX
Yin et al.(2017)
BARX2_FL_Methyl-HT-SELEX
0.644 0.544
PROP1
M00317_2.00
Homo sapiens
HAAYNNNNNN

NNNNNNRTTD
PBM
Barrera et al.(2016)
PROP1_REF
0.642 0.491
Prop1
M00498_2.00
Mus musculus
NRAKDDN

NHHMTYN
PBM
Berger et al.(2008)
Prop1_3949
0.642 0.491
PROP1
M03216_2.00
Homo sapiens
TAATTHRATTA

TAATYDAATTA
SELEX
Jolma et al.(2013)
PROP1_1
0.642 0.491
PROP1
M03217_2.00
Homo sapiens
TAATKNRRTTA

TAAYYNMATTA
SELEX
Jolma et al.(2013)
PROP1_2
0.642 0.491
PROP1
M05298_2.00
Homo sapiens
WAATTNNRTTD

HAAYNNAATTW
SELEX
Yin et al.(2017)
PROP1_eDBD_HT-SELEX
0.642 0.491
PROP1
M05301_2.00
Homo sapiens
TAATTNVATTA

TAATBNAATTA
SELEX
Yin et al.(2017)
PROP1_FL_HT-SELEX
0.642 0.491
Prop1
M09210_2.00
Mus musculus
TAATKRRATTA

TAATYYMATTA
Misc
Kulakovskiy et al.(2013)
PROP1_MOUSE.H11MO.0.C
0.642 0.491
PROP1
M10777_2.00
Sus scrofa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PROP1_01
0.642 0.491
PROP1
M10737_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PROP1_Q2
0.642 0.491
PROP1
M00315_2.00
Homo sapiens
NNHNATNN

NNATNDNN
PBM
Barrera et al.(2016)
PROP1_R112Q
0.642 0.491
PROP1
M05299_2.00
Homo sapiens
TAATTNVRTTW

WAAYBNAATTA
SELEX
Yin et al.(2017)
PROP1_eDBD_Methyl-HT-SELEX_1
0.642 0.491
PROP1
M05300_2.00
Homo sapiens
TAAYNDCRTTA

TAAYGHNRTTA
SELEX
Yin et al.(2017)
PROP1_eDBD_Methyl-HT-SELEX_2
0.642 0.491
PROP1
M05302_2.00
Homo sapiens
TAATTNVRTTA

TAAYBNAATTA
SELEX
Yin et al.(2017)
PROP1_FL_Methyl-HT-SELEX_1
0.642 0.491
PROP1
M05303_2.00
Homo sapiens
TAATYRVRTTA

TAAYBYRATTA
SELEX
Yin et al.(2017)
PROP1_FL_Methyl-HT-SELEX_2
0.642 0.491
eve
M00556_2.00
Drosophila melanogaster
NNTAATTARN

NYTAATTANN
PBM
Busser et al.(2012a)
Eve
0.640 0.474
eve
M02115_2.00
Drosophila melanogaster
NTAATNDNN

NNHNATTAN
PBM
Weirauch et al.(2014)
pTH6436
0.640 0.474
eve
M03794_2.00
Drosophila melanogaster
VYTAATKASN

NSTMATTARB
SELEX
Nitta et al.(2015)
eve_1
0.640 0.474
eve
M06486_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Mathelier et al.(2014)
MA0221.1
0.640 0.474
eve
M06240_2.00
Drosophila melanogaster
DYTAATKA

TMATTARH
B1H
Zhu et al.(2011)
Eve_Cell_FBgn0000606
0.640 0.474
eve
M06241_2.00
Drosophila melanogaster
HKBTAAYNDTKY

RMAHNRTTAVMD
B1H
Zhu et al.(2011)
eve_FlyReg_FBgn0000606
0.640 0.474
eve
M06242_2.00
Drosophila melanogaster
NYTAATKA

TMATTARN
B1H
Zhu et al.(2011)
Eve_SOLEXA_FBgn0000606
0.640 0.474
eve
M09678_2.00
Drosophila melanogaster
NKHTAATKD

HMATTADMN
Misc
Kulakovskiy et al.(2009)
eve
0.640 0.474
eve
M10786_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$EVE_Q6
0.640 0.474
HOXC4
M00328_2.00
Homo sapiens
YTAATTAB

VTAATTAR
PBM
Barrera et al.(2016)
HOXC4_N178S
0.638 0.509
HOXC4
M00330_2.00
Homo sapiens
YTAATTRB

VYAATTAR
PBM
Barrera et al.(2016)
HOXC4_REF
0.638 0.491
Hoxc4
M00530_2.00
Mus musculus
NWAATNDNN

NNHNATTWN
PBM
Berger et al.(2008)
Hoxc4_3491
0.638 0.491
HOXC4
M05385_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXC4_FL_HT-SELEX
0.638 0.491
lin-39
M08211_2.00
Caenorhabditis elegans
GATTGATG

CATCAATC
ChIP-seq
Contrino et al.(2012)
Mw154
0.638 0.491
lin-39
M09582_2.00
Caenorhabditis elegans
DTGATWRATK

MATYWATCAH
Misc
Heinz et al.(2010)
cElegans.L3-LIN39_modEncode
0.638 0.491
HOXC4
M05386_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_1
0.638 0.491
HOXC4
M05387_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_2
0.638 0.491
Mnx1
M00388_2.00
Mus musculus
NTAATBDNNN

NNNHVATTAN
PBM
Berger et al.(2008)
Hlxb9_3422
0.638 0.526
MNX1
M03143_2.00
Homo sapiens
NHTAATTRNH

DNYAATTADN
SELEX
Jolma et al.(2013)
MNX1_1
0.638 0.526
MNX1
M05126_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
MNX1_eDBD_HT-SELEX
0.638 0.526
MNX1
M05127_2.00
Homo sapiens
HTAAYGHB

VDCRTTAD
SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_1
0.638 0.526
MNX1
M05128_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_2
0.638 0.526
VSX1
M00269_2.00
Homo sapiens
NNWAAYNNN

NNNRTTWNN
PBM
Barrera et al.(2016)
VSX1_REF
0.637 0.474
Vsx1
M00459_2.00
Mus musculus
NNTAATDDN

NHHATTANN
PBM
Berger et al.(2008)
Vsx1_1728
0.637 0.474
Vsx1
M03267_2.00
Mus musculus
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
Vsx1_1
0.637 0.474
VSX1
M00266_2.00
Homo sapiens
NNTAAYNNN

NNNRTTANN
PBM
Barrera et al.(2016)
VSX1_G160D
0.637 0.474
HOXA2
M02083_2.00
Homo sapiens
NNNDHHNNN

NNNDDHNNN
PBM
Weirauch et al.(2014)
pTH5887
0.636 0.474
Hoxa2
M00403_2.00
Mus musculus
NTAATKRNN

NNYMATTAN
PBM
Berger et al.(2008)
Hoxa2_3079
0.636 0.474
HOXA2
M03097_2.00
Homo sapiens
NBTAATKRNN

NNYMATTAVN
SELEX
Jolma et al.(2013)
HOXA2_1
0.636 0.474
HOXB2
M03213_2.00
Homo sapiens
NNTAATKRNN

NNYMATTANN
SELEX
Jolma et al.(2013)
HOXB2_1
0.636 0.474
Hoxa2
M03251_2.00
Mus musculus
NNTAATKRNN

NNYMATTANN
SELEX
Jolma et al.(2013)
Hoxa2_1
0.636 0.474
HOXA2
M04962_2.00
Homo sapiens
NTAATKRV

BYMATTAN
SELEX
Yin et al.(2017)
HOXA2_eDBD_HT-SELEX
0.636 0.474
HOXA2
M04965_2.00
Homo sapiens
NTAATKAB

VTMATTAN
SELEX
Yin et al.(2017)
HOXA2_FL_HT-SELEX
0.636 0.474
HOXB2
M05292_2.00
Homo sapiens
BTAATKRV

BYMATTAV
SELEX
Yin et al.(2017)
HOXB2_eDBD_HT-SELEX
0.636 0.474
Hoxa2
M09566_2.00
Mus musculus
DTGATKGATKDB

VHMATCMATCAH
Misc
Heinz et al.(2010)
mES-Hoxa2_Donaldson_et_al.
0.636 0.474
HOXA2
M04963_2.00
Homo sapiens
NTAATTAN

NTAATTAN
SELEX
Yin et al.(2017)
HOXA2_eDBD_Methyl-HT-SELEX_1
0.636 0.474
HOXA2
M04964_2.00
Homo sapiens
HTAAYGAB

VTCRTTAD
SELEX
Yin et al.(2017)
HOXA2_eDBD_Methyl-HT-SELEX_2
0.636 0.474
HOXA2
M04966_2.00
Homo sapiens
NTAATKAB

VTMATTAN
SELEX
Yin et al.(2017)
HOXA2_FL_Methyl-HT-SELEX_1
0.636 0.474
HOXA2
M04967_2.00
Homo sapiens
HTAAYGAB

VTCRTTAD
SELEX
Yin et al.(2017)
HOXA2_FL_Methyl-HT-SELEX_2
0.636 0.474
HOXB2
M05293_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXB2_eDBD_Methyl-HT-SELEX_1
0.636 0.474
HOXB2
M05294_2.00
Homo sapiens
HTAAYGAB

VTCRTTAD
SELEX
Yin et al.(2017)
HOXB2_eDBD_Methyl-HT-SELEX_2
0.636 0.474
Hoxa1
M00450_2.00
Mus musculus
NHRATKRNN

NNYMATYDN
PBM
Berger et al.(2008)
Hoxa1_3425
0.635 0.526
HOXA1
M03096_2.00
Homo sapiens
NNTAATTRNN

NNYAATTANN
SELEX
Jolma et al.(2013)
HOXA1_1
0.635 0.526
HOXA1
M04959_2.00
Homo sapiens
NTMATKAN

NTMATKAN
SELEX
Yin et al.(2017)
HOXA1_FL_HT-SELEX
0.635 0.526
HOXA1
M09133_2.00
Homo sapiens
NKGATGGATG

CATCCATCMN
Misc
Kulakovskiy et al.(2013)
HXA1_HUMAN.H11MO.0.C
0.635 0.526
Hoxa1
M09196_2.00
Mus musculus
NKGATGGATG

CATCCATCMN
Misc
Kulakovskiy et al.(2013)
HXA1_MOUSE.H11MO.0.C
0.635 0.526
HOXA1
M04960_2.00
Homo sapiens
NTMATKAN

NTMATKAN
SELEX
Yin et al.(2017)
HOXA1_FL_Methyl-HT-SELEX_1
0.635 0.526
HOXA1
M04961_2.00
Homo sapiens
NTAAYGAB

VTCRTTAN
SELEX
Yin et al.(2017)
HOXA1_FL_Methyl-HT-SELEX_2
0.635 0.526
zfhx4
M02108_2.00
Tetraodon nigroviridis
NNTAATTRN

NYAATTANN
PBM
Weirauch et al.(2014)
pTH5654
0.635 0.386
PROP1
M00316_2.00
Homo sapiens
DTAATTRK

MYAATTAH
PBM
Barrera et al.(2016)
PROP1_R99Q
0.634 0.474
Dlx2
M00423_2.00
Mus musculus
NTAATNDNN

NNHNATTAN
PBM
Berger et al.(2008)
Dlx2_2273
0.634 0.526
Dll
M02112_2.00
Drosophila melanogaster
NVTAATTANN

NNTAATTABN
PBM
Weirauch et al.(2014)
pTH5506
0.634 0.526
DLX2
M03118_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
DLX2_1
0.634 0.526
Dlx2
M03254_2.00
Mus musculus
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
Dlx2_1
0.634 0.526
Dll
M03777_2.00
Drosophila melanogaster
NTAATTRN

NYAATTAN
SELEX
Nitta et al.(2015)
Dll_1
0.634 0.526
Dll
M03778_2.00
Drosophila melanogaster
NTAATTRN

NYAATTAN
SELEX
Nitta et al.(2015)
Dll_2
0.634 0.526
DLX2
M05026_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
DLX2_eDBD_HT-SELEX
0.634 0.526
DLX2
M05028_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
DLX2_FL_HT-SELEX
0.634 0.526
Dll
M06479_2.00
Drosophila melanogaster
TAATTDB

VHAATTA
B1H
Mathelier et al.(2014)
MA0187.1
0.634 0.526
Dll
M06217_2.00
Drosophila melanogaster
TAATTDB

VHAATTA
B1H
Zhu et al.(2011)
Dll_Cell_FBgn0000157
0.634 0.526
Dll
M06218_2.00
Drosophila melanogaster
TAATKR

YMATTA
B1H
Zhu et al.(2011)
Dll_SOLEXA_FBgn0000157
0.634 0.526
DLX2
M10674_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DLX2_Q6
0.634 0.526
DLX2
M05027_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
DLX2_eDBD_Methyl-HT-SELEX
0.634 0.526
DLX2
M05029_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
DLX2_FL_Methyl-HT-SELEX
0.634 0.526
bsh
M02113_2.00
Drosophila melanogaster
NNTAAYBDNN

NNHVRTTANN
PBM
Weirauch et al.(2014)
pTH6569
0.631 0.561
bsh
M03786_2.00
Drosophila melanogaster
TAATYTAATTA

TAATTARATTA
SELEX
Nitta et al.(2015)
bsh_1
0.631 0.561
bsh
M03787_2.00
Drosophila melanogaster
TAATTRVWTAATKR

YMATTAWBYAATTA
SELEX
Nitta et al.(2015)
bsh_2
0.631 0.561
bsh
M03788_2.00
Drosophila melanogaster
NTAATBRN

NYVATTAN
SELEX
Nitta et al.(2015)
bsh_3
0.631 0.561
bsh
M06483_2.00
Drosophila melanogaster
YTAATBR

YVATTAR
B1H
Mathelier et al.(2014)
MA0214.1
0.631 0.561
bsh
M06231_2.00
Drosophila melanogaster
HYTAATBRV

BYVATTARD
B1H
Zhu et al.(2011)
Bsh_Cell_FBgn0000529
0.631 0.561
bsh
M06232_2.00
Drosophila melanogaster
NTAATKR

YMATTAN
B1H
Zhu et al.(2011)
Bsh_SOLEXA_FBgn0000529
0.631 0.561
ARX
M00261_2.00
Homo sapiens
NNWRAYNNN

NNNRTYWNN
PBM
Barrera et al.(2016)
ARX_P353L
0.631 0.544
ARX
M00264_2.00
Homo sapiens
NNWRATNNN

NNNATYWNN
PBM
Barrera et al.(2016)
ARX_REF
0.630 0.526
Arx
M00467_2.00
Mus musculus
NTAATTDN

NHAATTAN
PBM
Berger et al.(2008)
Arx_1738
0.630 0.526
ARX
M03076_2.00
Homo sapiens
NTAATYNRATTAN

NTAATYNRATTAN
SELEX
Jolma et al.(2013)
ARX_1
0.630 0.526
Arx
M03269_2.00
Mus musculus
NTAATYNRATTAN

NTAATYNRATTAN
SELEX
Jolma et al.(2013)
Arx_1
0.630 0.526
ARX
M04895_2.00
Homo sapiens
BTAATTRR

YYAATTAV
SELEX
Yin et al.(2017)
ARX_eDBD_HT-SELEX
0.630 0.526
Arx
M10775_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ARX_05
0.630 0.526
ARX
M00262_2.00
Homo sapiens
ATAATTAT

ATAATTAT
PBM
Barrera et al.(2016)
ARX_P353R
0.630 0.526
ARX
M04896_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
ARX_eDBD_Methyl-HT-SELEX
0.630 0.526
Uncx
M00443_2.00
Mus musculus
NTAATNDN

NHNATTAN
PBM
Berger et al.(2008)
Uncx4
0.630 0.509
uncx
M02111_2.00
Tetraodon nigroviridis
NNTAATTRN

NYAATTANN
PBM
Weirauch et al.(2014)
pTH5474
0.630 0.509
UNCX
M03191_2.00
Homo sapiens
NWAATTVVRTHWN

NWDAYBBAATTWN
SELEX
Jolma et al.(2013)
UNCX_1
0.630 0.509
UNCX
M03192_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
UNCX_2
0.630 0.509
Uncx
M03264_2.00
Mus musculus
NTAATTVRATTAN

NTAATYBAATTAN
SELEX
Jolma et al.(2013)
Uncx_1
0.630 0.509
Uncx
M03265_2.00
Mus musculus
NTAATTRR

YYAATTAN
SELEX
Jolma et al.(2013)
Uncx_2
0.630 0.509
unc-4
M03846_2.00
Drosophila melanogaster
TAATTNAATTA

TAATTNAATTA
SELEX
Nitta et al.(2015)
unc-4_1
0.630 0.509
UNCX
M05240_2.00
Homo sapiens
NYAATTRV

BYAATTRN
SELEX
Yin et al.(2017)
UNCX_eDBD_HT-SELEX
0.630 0.509
unc-4
M06523_2.00
Drosophila melanogaster
YTAATTR

YAATTAR
B1H
Mathelier et al.(2014)
MA0250.1
0.630 0.509
ARX
M00260_2.00
Homo sapiens
NMTAATTANNN

NNNTAATTAKN
PBM
Barrera et al.(2016)
ARX_L343Q
0.630 0.509
UNCX
M05241_2.00
Homo sapiens
NYRRYKNN

NNMRYYRN
SELEX
Yin et al.(2017)
UNCX_eDBD_Methyl-HT-SELEX
0.630 0.509
unpg
M03836_2.00
Drosophila melanogaster
SSTAATYRVN

NBYRATTASS
SELEX
Nitta et al.(2015)
unpg_1
0.630 0.561
unpg
M06517_2.00
Drosophila melanogaster
BTAATTR

YAATTAV
B1H
Mathelier et al.(2014)
MA0251.1
0.630 0.561
unpg
M06311_2.00
Drosophila melanogaster
NBTAATTR

YAATTAVN
B1H
Zhu et al.(2011)
Unpg_Cell_FBgn0015561
0.630 0.561
unpg
M06312_2.00
Drosophila melanogaster
HTAATTR

YAATTAD
B1H
Zhu et al.(2011)
Unpg_SOLEXA_FBgn0015561
0.630 0.561
repo
M03826_2.00
Drosophila melanogaster
VTTAATTARB

VYTAATTAAB
SELEX
Nitta et al.(2015)
repo_1
0.629 0.526
repo
M03827_2.00
Drosophila melanogaster
VKYAATTRRN

NYYAATTRMB
SELEX
Nitta et al.(2015)
repo_2
0.629 0.526
repo
M03828_2.00
Drosophila melanogaster
VBYAATTRVNNBYAATTRVB

VBYAATTRVNNBYAATTRVB
SELEX
Nitta et al.(2015)
repo_3
0.629 0.526
repo
M06511_2.00
Drosophila melanogaster
TTAATTA

TAATTAA
B1H
Mathelier et al.(2014)
MA0240.1
0.629 0.526
repo
M06301_2.00
Drosophila melanogaster
DTTAATTA

TAATTAAH
B1H
Zhu et al.(2011)
Repo_Cell_FBgn0011701
0.629 0.526
repo
M06302_2.00
Drosophila melanogaster
YTAATTR

YAATTAR
B1H
Zhu et al.(2011)
Repo_SOLEXA_FBgn0011701
0.629 0.526
Q24780_9CNID
M02205_2.00
Eleutheria dichotoma
NNYTAATTAMN

NKTAATTARNN
PBM
Weirauch et al.(2014)
pTH6308
0.629 0.456
SHOX
M02095_2.00
Homo sapiens
NTAATTRN

NYAATTAN
PBM
Weirauch et al.(2014)
pTH5805
0.629 0.509
Shox2
M00439_2.00
Mus musculus
NTAATDDN

NHHATTAN
PBM
Berger et al.(2008)
Shox2_2641
0.629 0.509
SHOX
M03232_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
SHOX_1
0.629 0.509
SHOX2
M03204_2.00
Homo sapiens
BTAATTRN

NYAATTAV
SELEX
Jolma et al.(2013)
SHOX2_1
0.629 0.509
Shox2
M03263_2.00
Mus musculus
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
Shox2_1
0.629 0.509
SHOX
M05366_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
SHOX_eDBD_HT-SELEX
0.629 0.509
Shox2
M10772_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SHOX2_05
0.629 0.509
SHOX
M05367_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
SHOX_eDBD_Methyl-HT-SELEX_1
0.629 0.509
SHOX
M05368_2.00
Homo sapiens
NTAAYGAN

NTCRTTAN
SELEX
Yin et al.(2017)
SHOX_eDBD_Methyl-HT-SELEX_2
0.629 0.509
CG5369
M03876_2.00
Drosophila melanogaster
TAATTHVATTA

TAATBDAATTA
SELEX
Nitta et al.(2015)
CG5369_1
0.629 0.491
CG5369
M03877_2.00
Drosophila melanogaster
TAATTRNNTAATBN

NVATTANNYAATTA
SELEX
Nitta et al.(2015)
CG5369_2
0.629 0.491
CG5369
M03878_2.00
Drosophila melanogaster
TAATTVRATWA

TWATYBAATTA
SELEX
Nitta et al.(2015)
CG5369_3
0.629 0.491
Bsx
M00516_2.00
Mus musculus
NTAAYBDNN

NNHVRTTAN
PBM
Berger et al.(2008)
Bsx_3483
0.629 0.544
BSX
M03235_2.00
Homo sapiens
NTAATBRN

NYVATTAN
SELEX
Jolma et al.(2013)
BSX_1
0.629 0.544
BSX
M05377_2.00
Homo sapiens
NTAAYGHB

VDCRTTAN
SELEX
Yin et al.(2017)
BSX_eDBD_HT-SELEX_1
0.629 0.544
BSX
M05378_2.00
Homo sapiens
BTAATBRV

BYVATTAV
SELEX
Yin et al.(2017)
BSX_eDBD_HT-SELEX_2
0.629 0.544
BSX
M05379_2.00
Homo sapiens
NTAAYGHB

VDCRTTAN
SELEX
Yin et al.(2017)
BSX_eDBD_Methyl-HT-SELEX_1
0.629 0.544
BSX
M05380_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
BSX_eDBD_Methyl-HT-SELEX_2
0.629 0.544
hbn
M03813_2.00
Drosophila melanogaster
HTAATYTAATTAD

HTAATTARATTAD
SELEX
Nitta et al.(2015)
hbn_1
0.629 0.526
hbn
M06506_2.00
Drosophila melanogaster
TTAATTR

YAATTAA
B1H
Mathelier et al.(2014)
MA0226.1
0.629 0.526
hbn
M06291_2.00
Drosophila melanogaster
TWAWTTR

YAAWTWA
B1H
Zhu et al.(2011)
Hbn_Cell_FBgn0008636
0.629 0.526
hbn
M06292_2.00
Drosophila melanogaster
NHTAATTR

YAATTADN
B1H
Zhu et al.(2011)
Hbn_SOLEXA_FBgn0008636
0.629 0.526
OdsH
M03851_2.00
Drosophila melanogaster
NTAATTRN

NYAATTAN
SELEX
Nitta et al.(2015)
OdsH_1
0.629 0.456
OdsH
M03852_2.00
Drosophila melanogaster
TAATBNVATTA

TAATBNVATTA
SELEX
Nitta et al.(2015)
OdsH_2
0.629 0.456
OdsH
M06528_2.00
Drosophila melanogaster
BTAATTR

YAATTAV
B1H
Mathelier et al.(2014)
MA0198.1
0.629 0.456
OdsH
M06330_2.00
Drosophila melanogaster
BTAATTR

YAATTAV
B1H
Zhu et al.(2011)
Odsh_Cell_FBgn0026058
0.629 0.456
OdsH
M06331_2.00
Drosophila melanogaster
NHTAATTR

YAATTADN
B1H
Zhu et al.(2011)
Odsh_SOLEXA_FBgn0026058
0.629 0.456
Lhx4
M00430_2.00
Mus musculus
NYAATHN

NDATTRN
PBM
Berger et al.(2008)
Lhx4_1719
0.628 0.456
Lhx3
M00435_2.00
Mus musculus
NNNYAATHW

WDATTRNNN
PBM
Berger et al.(2008)
Lhx3_3431
0.628 0.456
Lim3
M02116_2.00
Drosophila melanogaster
NNNNNATBRN

NYVATNNNNN
PBM
Weirauch et al.(2014)
pTH6478
0.628 0.456
Lhx4
M03257_2.00
Mus musculus
BTAATTRN

NYAATTAV
SELEX
Jolma et al.(2013)
Lhx4_1
0.628 0.456
Lim3
M03796_2.00
Drosophila melanogaster
BTAATTAV

BTAATTAV
SELEX
Nitta et al.(2015)
Lim3_1
0.628 0.456
LHX4
M05063_2.00
Homo sapiens
BYAATYRV

BYRATTRV
SELEX
Yin et al.(2017)
LHX4_eDBD_HT-SELEX
0.628 0.456
LHX4
M05066_2.00
Homo sapiens
BTAATTAN

NTAATTAV
SELEX
Yin et al.(2017)
LHX4_FL_HT-SELEX
0.628 0.456
Lim3
M06492_2.00
Drosophila melanogaster
HTAATKA

TMATTAD
B1H
Mathelier et al.(2014)
MA0195.1
0.628 0.456
Lim3
M06258_2.00
Drosophila melanogaster
HHTAATKA

TMATTADD
B1H
Zhu et al.(2011)
Lim3_Cell_FBgn0002023
0.628 0.456
Lim3
M06259_2.00
Drosophila melanogaster
HTRATTR

YAATYAD
B1H
Zhu et al.(2011)
Lim3_SOLEXA_FBgn0002023
0.628 0.456
Lhx3
M02687_2.00
Mus musculus
VRWTAATTAATTW

WAATTAATTAWYB
SELEX
Mathelier et al.(2014)
MA0135.1
0.628 0.456
LHX3
M09137_2.00
Homo sapiens
NYTAATTAAWTHH

DDAWTTAATTARN
Misc
Kulakovskiy et al.(2013)
LHX3_HUMAN.H11MO.0.C
0.628 0.456
Lhx3
M09188_2.00
Mus musculus
NYTRATKRV

BYMATYARN
Misc
Kulakovskiy et al.(2013)
LHX3_MOUSE.H11MO.0.C
0.628 0.456
Lhx3
M09570_2.00
Mus musculus
NNBTAATTAV

BTAATTAVNN
Misc
Heinz et al.(2010)
Neuron-Lhx3_GSE31456
0.628 0.456
LHX3
M10657_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LHX3A_01
0.628 0.456
LHX3
M10658_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LHX3b_01
0.628 0.456
LHX3
M10659_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LHX3_Q3
0.628 0.456
LHX4
M05064_2.00
Homo sapiens
BYAATTRV

BYAATTRV
SELEX
Yin et al.(2017)
LHX4_eDBD_Methyl-HT-SELEX_1
0.628 0.456
LHX4
M05065_2.00
Homo sapiens
NTWAYGHN

NDCRTWAN
SELEX
Yin et al.(2017)
LHX4_eDBD_Methyl-HT-SELEX_2
0.628 0.456
LHX4
M05067_2.00
Homo sapiens
NYAATTRN

NYAATTRN
SELEX
Yin et al.(2017)
LHX4_FL_Methyl-HT-SELEX_1
0.628 0.456
LHX4
M05068_2.00
Homo sapiens
NTAAYGHN

NDCRTTAN
SELEX
Yin et al.(2017)
LHX4_FL_Methyl-HT-SELEX_2
0.628 0.456
Hoxa4
M00383_2.00
Mus musculus
NTAATBDNN

NNHVATTAN
PBM
Berger et al.(2008)
Hoxa4_3426
0.627 0.491
HOXA4
M05381_2.00
Homo sapiens
NTAATKRY

RYMATTAN
SELEX
Yin et al.(2017)
HOXA4_eDBD_HT-SELEX
0.627 0.491
HOXA4
M10755_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA4_Q2
0.627 0.491
HOXA4
M05382_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXA4_eDBD_Methyl-HT-SELEX
0.627 0.491
Hoxa5
M00478_2.00
Mus musculus
NTAATNDNN

NNHNATTAN
PBM
Berger et al.(2008)
Hoxa5_3415
0.627 0.474
Hoxb4
M00479_2.00
Mus musculus
NTAATNDNN

NNHNATTAN
PBM
Berger et al.(2008)
Hoxb4_2627
0.627 0.474
Hoxb5
M00480_2.00
Mus musculus
NWDWTNNNN

NNNNAWHWN
PBM
Berger et al.(2008)
Hoxb5_3122
0.627 0.474
HOXB5
M03125_2.00
Homo sapiens
NNKAATKRNN

NNYMATTMNN
SELEX
Jolma et al.(2013)
HOXB5_1
0.627 0.474
Dfd
M03784_2.00
Drosophila melanogaster
VNTAAYKRBN

NVYMRTTANB
SELEX
Nitta et al.(2015)
Dfd_1
0.627 0.474
Dfd
M03785_2.00
Drosophila melanogaster
VYTAATKAYN

NRTMATTARB
SELEX
Nitta et al.(2015)
Dfd_2
0.627 0.474
HOXA5
M04968_2.00
Homo sapiens
STAATKRS

SYMATTAS
SELEX
Yin et al.(2017)
HOXA5_eDBD_HT-SELEX
0.627 0.474
HOXA5
M04971_2.00
Homo sapiens
NTMATKRB

VYMATKAN
SELEX
Yin et al.(2017)
HOXA5_FL_HT-SELEX
0.627 0.474
HOXB4
M05343_2.00
Homo sapiens
YTAATKAY

RTMATTAR
SELEX
Yin et al.(2017)
HOXB4_FL_HT-SELEX
0.627 0.474
HOXB5
M05051_2.00
Homo sapiens
NTAATKRV

BYMATTAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_HT-SELEX
0.627 0.474
HOXB5
M05054_2.00
Homo sapiens
STMATKAB

VTMATKAS
SELEX
Yin et al.(2017)
HOXB5_FL_HT-SELEX
0.627 0.474
HOXD4
M05273_2.00
Homo sapiens
NTMATKRV

BYMATKAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_HT-SELEX
0.627 0.474
HOXD4
M05276_2.00
Homo sapiens
NTAATKRB

VYMATTAN
SELEX
Yin et al.(2017)
HOXD4_FL_HT-SELEX
0.627 0.474
Dfd
M06481_2.00
Drosophila melanogaster
YTAATGA

TCATTAR
B1H
Mathelier et al.(2014)
MA0186.1
0.627 0.474
Dfd
M06226_2.00
Drosophila melanogaster
VYTAATGA

TCATTAAB
B1H
Zhu et al.(2011)
Dfd_Cell_FBgn0000439
0.627 0.474
Dfd
M06227_2.00
Drosophila melanogaster
TTAATKRY

RYMATTAA
B1H
Zhu et al.(2011)
Dfd_FlyReg_FBgn0000439
0.627 0.474
Dfd
M06228_2.00
Drosophila melanogaster
NBTAATKR

YMATTAVN
B1H
Zhu et al.(2011)
Dfd_SOLEXA_FBgn0000439
0.627 0.474
HOXB4
M09162_2.00
Homo sapiens
YTAATKRS

SYMATTAR
Misc
Kulakovskiy et al.(2013)
HXB4_HUMAN.H11MO.0.B
0.627 0.474
Hoxb4
M09204_2.00
Mus musculus
YTAATKRS

SYMATTAR
Misc
Kulakovskiy et al.(2013)
HXB4_MOUSE.H11MO.0.A
0.627 0.474
Hoxb4
M09576_2.00
Mus musculus
TGATDRATKRSN

NSYMATYHATCA
Misc
Heinz et al.(2010)
ES-Hoxb4_GSE34014
0.627 0.474
Dfd
M09675_2.00
Drosophila melanogaster
TTAATKRB

VYMATTAA
Misc
Kulakovskiy et al.(2009)
Dfd
0.627 0.474
Dfd
M10784_2.00
Drosophila melanogaster
NNNNRKTAATNNNNNN

NNNNNNATTAMYNNNN
Transfac
Matys et al.(2006)
I$DFD_01
0.627 0.474
HOXA5
M10652_2.00
Homo sapiens
NGRDBKBDHNBAVTAATKRRGRDVDDDGSR

YSCHHHBHYCYYMATTABTVNDHVMVHYCN
Transfac
Matys et al.(2006)
V$HOX13_01
0.627 0.474
HOXA5
M08457_2.00
Homo sapiens
CDBWAATK

MATTWVHG
COMPILED
Mathelier et al.(2014)
MA0158.1
0.627 0.474
HOXA5
M04969_2.00
Homo sapiens
BTAATKRV

BYMATTAV
SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_1
0.627 0.474
HOXA5
M04970_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_2
0.627 0.474
HOXA5
M04972_2.00
Homo sapiens
NTMATKRN

NYMATKAN
SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_1
0.627 0.474
HOXA5
M04973_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_2
0.627 0.474
HOXB4
M05344_2.00
Homo sapiens
HTAAYGAY

RTCRTTAD
SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_1
0.627 0.474
HOXB4
M05345_2.00
Homo sapiens
HTAAYKAB

VTMRTTAD
SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_2
0.627 0.474
HOXB5
M05052_2.00
Homo sapiens
NTMATKRN

NYMATKAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_1
0.627 0.474