CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CC1G_01833
(
Coprinopsis cinerea
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
CC1G_01833
T205754_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q00354_COPCI
M02160_2.00
Coprinopsis cinerea
ACCAATCV
BGATTGGT
PBM
Weirauch et al.(2014)
pTH6354
0.734
0.839
Q9C1N5_COPSC
M02216_2.00
Coprinopsis scobicola
NBCAATCVN
NBGATTGVN
PBM
Weirauch et al.(2014)
pTH5843
0.688
0.857
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EAU92788
Homeodomain
105
160
PKRTPFNAEYTPLLEKYFEYNAFPPLRDREWLARKSMMTPRQIEVWFQNHRRRARN
Links
Other
Homeodomain
family TFs
Other
Coprinopsis cinerea
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CC1G_13704
Coprinopsis cinerea
CC1G_13704
I
0.734
Q00354_COPCI
Coprinopsis cinerea
Q00354_COPCI
D
0.734
Q9C1N5_COPSC
Coprinopsis scobicola
Q9C1N5_COPSC
D
0.688