CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CC1G_12380
(
Coprinopsis cinerea
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
CC1G_12380
T205764_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
kal-1
M02225_2.00
Neurospora crassa
NNNNRHNN
NNDYNNNN
PBM
Weirauch et al.(2014)
pTH8911
0.624
0.544
Q86SD7_PODCA
M02213_2.00
Podocoryne carnea
NNTAATTADN
NHTAATTANN
PBM
Weirauch et al.(2014)
pTH6136
0.605
0.404
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EAU83072
Homeodomain
63
119
KQKRSRVNHVQLKRLEELFAMDPAPPPMVRKEIAEELQMSERQTQIWFQNRRAKEKN
Links
Other
Homeodomain
family TFs
Other
Coprinopsis cinerea
TFs
156 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy