CGI_10011883 (Crassostrea gigas)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 CGI_10011883 T205825_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ara
M06518_2.00
Drosophila melanogaster
WWACA

TGTWW
B1H
Mathelier et al.(2014)
MA0210.1
0.840 0.877
caup
M06519_2.00
Drosophila melanogaster
WAACA

TGTTW
B1H
Mathelier et al.(2014)
MA0217.1
0.840 0.877
ara
M06313_2.00
Drosophila melanogaster
TGTWWWNN

NNWWWACA
B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904
0.840 0.877
ara
M06314_2.00
Drosophila melanogaster
DWWACA

TGTWWH
B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904
0.840 0.877
caup
M06315_2.00
Drosophila melanogaster
HWDWAACA

TGTTWHWD
B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919
0.840 0.877
caup
M06316_2.00
Drosophila melanogaster
NDDACA

TGTHHN
B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919
0.840 0.877
Irx6
M00456_2.00
Mus musculus
NNDAHWN

NWDTHNN
PBM
Berger et al.(2008)
Irx6_2623
0.809 0.895
Irx2
M00386_2.00
Mus musculus
NNDACAHNN

NNDTGTHNN
PBM
Berger et al.(2008)
Irx2_0900
0.800 0.825
Irx5
M00455_2.00
Mus musculus
NNNDACAHN

NDTGTHNNN
PBM
Berger et al.(2008)
Irx5_2385
0.800 0.825
IRX2
M03212_2.00
Homo sapiens
NDACAYRACAHN

NDTGTYRTGTHN
SELEX
Jolma et al.(2013)
IRX2_1
0.800 0.825
IRX5
M03222_2.00
Homo sapiens
NDACAYRACAHN

NDTGTYRTGTHN
SELEX
Jolma et al.(2013)
IRX5_1
0.800 0.825
IRX5
M05315_2.00
Homo sapiens
NBDTGTHNDACAYVN

NBRTGTHNDACAHVN
SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX
0.800 0.825
IRX5
M05316_2.00
Homo sapiens
WYRYGHHNHAYRYRY

RYRYRTDNDDCRYRW
SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX
0.800 0.825
Irx4
M00416_2.00
Mus musculus
NNNDAMAH

DTKTHNNN
PBM
Berger et al.(2008)
Irx4_2242
0.789 0.877
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC23960 Homeodomain 129 188

Links

Other Homeodomain family TFs
Other Crassostrea gigas TFs

387 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1O1_01785 Capronia coronata A1O1_01785 I 0.000
A1O3_00442 Capronia epimyces A1O3_00442 I 0.000
A1O5_01181 Cladophialophora psammophila A1O5_01181 I 0.000
A1O7_04739 Cladophialophora yegresii A1O7_04739 I 0.000
A1O9_01575 Exophiala aquamarina A1O9_01575 I 0.000
ACLA_003360 Aspergillus clavatus CADACLAG00000265 I 0.000
ACRE_024160 Acremonium chrysogenum ACRE_024160 I 0.000
AFUA_5G01900 Aspergillus fumigatus CADAFUAG00002829 I 0.000
ANIA_08035 Aspergillus nidulans CADANIAG00004056 D 0.000
ARB_00838 Arthroderma benhamiae ARB_00838 I 0.000
ATEG_09811 Aspergillus terreus CADATEAG00005526 I 0.000
BBA_04597 Beauveria bassiana BBA_04597 I 0.000
Bcin07g02120 Botrytis cinerea Bcin07g02120 I 0.000
BDDG_04090 Blastomyces dermatitidis BDDG_04090 I 0.000
BGHDH14_bgh04316 Blumeria graminis BGHDH14_bgh04316 I 0.000
CADAFLAG00001879 Aspergillus flavus CADAFLAG00001879 I 0.000
CADANGAG00012647 Aspergillus niger CADANGAG00012647 I 0.000
CADAORAG00001853 Aspergillus oryzae CADAORAG00001853 I 0.000
CAGL0H03443g Candida glabrata CAGL0H03443g I 0.000
CCM_05142 Cordyceps militaris CCM_05142 I 0.000
CFIO01_07236 Colletotrichum fioriniae CFIO01_07236 I 0.000
CGGC5_3575 Colletotrichum gloeosporioides CGGC5_3575 I 0.000
CH063_04925 Colletotrichum higginsianum CH063_04925 I 0.000
CHGG_10171 Chaetomium globosum CHGG_10171 I 0.000
CIMG_06399 Coccidioides immitis CIMG_06399 I 0.000
CMQ_8021 Grosmannia clavigera CMQ_8021 I 0.000
Cob_04137 Colletotrichum orbiculare Cob_04137 I 0.000
CPC735_029030 Coccidioides posadasii CPC735_029030 I 0.000
CPUR_03965 Claviceps purpurea CPUR_03965 I 0.000
CSUB01_01835 Colletotrichum sublineola CSUB01_01835 I 0.000
CTHT_0005280 Chaetomium thermophilum CTHT_0005280 I 0.000
EIN_219950 Entamoeba invadens EIN_219950 I 0.000
estExt_Genewise1.C_100340 Neurospora discreta estExt_Genewise1.C_100340 I 0.000
estExt_Genewise1.C_20646 Mucor circinelloides estExt_Genewise1.C_20646 I 0.000
EURHEDRAFT_466545 Aspergillus ruber EURHEDRAFT_466545 I 0.000
EV44_g1665 Erysiphe necator EV44_g1665 I 0.000
e_gw1.00168.79.1 Aspergillus carbonarius e_gw1.00168.79.1 I 0.000
F503_00932 Ophiostoma piceae uamh F503_00932 I 0.000
FFUJ_00659 Fusarium fujikuroi FFUJ_00659 I 0.000
fgenesh1_pg.C_scaffold_2000187 Cryphonectria parasitica fgenesh1_pg.C_scaffold_2000187 I 0.000
fgenesh1_pm.sca_1_chr1_3_0000414 Nectria haematococca fgenesh1_pm.sca_1_chr1_3_0000414 I 0.000
fgenesh2_kg.1_#_319_#_2595_1_CCUX_EXTA Fragilariopsis cylindrus fgenesh2_kg.1_#_319_#_2595_1_CCUX_EXTA N 0.000
FGRRES_00946 Fusarium graminearum FGRRES_00946 I 0.000
FOXG_00913 Fusarium oxysporum FOXG_00913 I 0.000
FPSE_01439 Fusarium pseudograminearum FPSE_01439 I 0.000
FVEG_00603 Fusarium verticillioides FVEG_00603 I 0.000
G647_03938 Cladophialophora carrionii G647_03938 I 0.000
GGTG_11222 Gaeumannomyces graminis GGTG_11222 I 0.000
GLRG_05065 Colletotrichum graminicola GLRG_05065 I 0.000
GMDG_04555 Pseudogymnoascus destructans GMDG_04555 I 0.000
H101_05876 Trichophyton interdigitale H101_05876 I 0.000
H102_04635 Trichophyton rubrum H102_04635 I 0.000
H105_04657 Trichophyton soudanense H105_04657 I 0.000
HMPREF1120_03187 Exophiala dermatitidis HMPREF1120_03187 I 0.000
HMPREF1541_10354 Cyphellophora europaea HMPREF1541_10354 I 0.000
HMPREF1624_03680 Sporothrix schenckii HMPREF1624_03680 I 0.000
hsf-1 Neurospora crassa NCU08512 D 0.000
M7I_0985 Glarea lozoyensis M7I_0985 I 0.000
MAC_00090 Metarhizium acridum MAC_00090 I 0.000
MAJ_06076 Metarhizium majus MAJ_06076 I 0.000
MAM_04055 Metarhizium album MAM_04055 I 0.000
MANI_007878 Metarhizium anisopliae MANI_007878 I 0.000
MAPG_00719 Magnaporthe poae MAPG_00719 I 0.000
MBM_05478 Marssonina brunnea MBM_05478 I 0.000
MBR_06838 Metarhizium brunneum MBR_06838 I 0.000
MCYG_02012 Microsporum canis MCYG_02012 I 0.000
MCYG_02012 Arthroderma otae MCYG_02012 I 0.000
MGG_03242 Magnaporthe oryzae MGG_03242 I 0.000
MGU_04528 Metarhizium guizhouense MGU_04528 I 0.000
MPH_06790 Macrophomina phaseolina MPH_06790 I 0.000
MYCTH_2312185 Myceliophthora thermophila MYCTH_2312185 I 0.000
NechaG90281 Fusarium solani NechaG90281 I 0.000
NEUTE1DRAFT_122850 Neurospora tetrasperma NEUTE1DRAFT_122850 I 0.000
NFIA_040210 Neosartorya fischeri CADNFIAG00003371 I 0.000
OIDMADRAFT_43104 Oidiodendron maius OIDMADRAFT_43104 I 0.000
PAAG_08464 Paracoccidioides sp lutzii PAAG_08464 I 0.000
PABG_00020 Paracoccidioides brasiliensis PABG_00020 I 0.000
Pc21g14490 Penicillium chrysogenum Pc21g14490 I 0.000
PCH_Pc21g14490 Penicillium rubens PCH_Pc21g14490 I 0.000
PDE_09961 Penicillium oxalicum PDE_09961 I 0.000
PDIP_47800 Penicillium digitatum PDIP_47800 I 0.000
PEX1_103830 Penicillium expansum PEX1_103830 I 0.000
PFICI_09272 Pestalotiopsis fici PFICI_09272 I 0.000
PITC_050180 Penicillium italicum PITC_050180 I 0.000
PMAA_039580 Talaromyces marneffei PMAA_039580 I 0.000
PMAA_039580 Penicillium marneffei PMAA_039580 I 0.000
PV04_04511 Capronia semiimmersa PV04_04511 I 0.000
PV05_06211 Exophiala xenobiotica PV05_06211 I 0.000
PV06_08883 Exophiala oligosperma PV06_08883 I 0.000
PV07_05328 Cladophialophora immunda PV07_05328 I 0.000
PV08_09369 Exophiala spinifera PV08_09369 I 0.000
PV09_00139 Verruconis gallopava PV09_00139 I 0.000
PV10_04260 Exophiala mesophila PV10_04260 I 0.000
PV11_01928 Exophiala sideris PV11_01928 I 0.000
PVAR5_0686 Byssochlamys spectabilis PVAR5_0686 I 0.000
S40285_02162 Stachybotrys chlorohalonata S40285_02162 I 0.000
S40288_03192 Stachybotrys chartarum S40288_03192 I 0.000
SAPIO_CDS6676 Scedosporium apiospermum SAPIO_CDS6676 I 0.000
SBOR_8417 Sclerotinia borealis SBOR_8417 I 0.000
SEPMUDRAFT_126550 Sphaerulina musiva SEPMUDRAFT_126550 I 0.000
SMAC_06240 Sordaria macrospora SMAC_06240 I 0.000
SPBR_01315 Sporothrix brasiliensis SPBR_01315 I 0.000
SS1G_02055 Sclerotinia sclerotiorum SS1G_02055 I 0.000
TEQG_06155 Trichophyton equinum TEQG_06155 I 0.000
TESG_06833 Trichophyton tonsurans TESG_06833 I 0.000
THITE_2123901 Thielavia terrestris THITE_2123901 I 0.000
TRIATDRAFT_153671 Trichoderma atroviride TRIATDRAFT_153671 I 0.000
TRIVIDRAFT_11553 Trichoderma virens TRIVIDRAFT_11553 I 0.000
TRV_07496 Trichophyton verrucosum TRV_07496 I 0.000
TSTA_079210 Talaromyces stipitatus TSTA_079210 I 0.000
U727_00430730201 Penicillium solitum U727_00430730201 I 0.000
UCREL1_891 Eutypa lata UCREL1_891 I 0.000
UCRNP2_367 Neofusicoccum parvum UCRNP2_367 I 0.000
UCRNP2_7828 Neofusicoccum parvum UCRNP2_7828 I 0.000
UCRPA7_5135 Togninia minima UCRPA7_5135 I 0.000
UREG_04004 Uncinocarpus reesii UREG_04004 I 0.000
V499_02686 Pseudogymnoascus pannorum V499_02686 I 0.000
VDAG_07024 Verticillium dahliae VDAG_07024 I 0.000
VDBG_05375 Verticillium alfalfae VDBG_05375 I 0.000
VDBG_05375 Verticillium albo atrum VDBG_05375 I 0.000
VHEMI10669 Torrubiella hemipterigena VHEMI10669 I 0.000
W97_05233 Coniosporium apollinis W97_05233 I 0.000
X797_000060 Metarhizium robertsii X797_000060 I 0.000
Z517_06439 Fonsecaea pedrosoi Z517_06439 I 0.000
Z518_00834 Rhinocladiella mackenziei Z518_00834 I 0.000
Z519_08449 Cladophialophora bantiana Z519_08449 I 0.000